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Detailed information on CNT3089114


BLAST search results

BLAST vs Swiss-Prot:
sp|P12372|PSAD_SOLLC, E-value = 3e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Vigna radiataOryza sativa28.4835.7781.75274forward
CNT30677834Vigna radiataSetaria viridis16.7433.9783.85161forward
CNT30522550Vigna radiataSetaria italica28.4857.5681.75274forward
CNT30639185Vigna radiataNymphaea colorata27.966382.9269forward
CNT30515273Vigna radiataJuglans regia27.2340.8782.06262forward
CNT30371945Vigna radiataArabidopsis thaliana19.8544.4281.68191forward
CNT30269143Vigna radiataChenopodium quinoa24.4330.2478.72235forward
CNT30380725Vigna radiataManihot esculenta28.2746.181.62272forward
CNT30403648Vigna radiataBeta vulgaris22.9719.9383.71221forward
CNT30525887Vigna radiataPhaseolus vulgaris23.861.2390.83229forward
CNT30630495Vigna radiataVigna unguiculata41.3770.1994.72398forward
CNT30197643Vigna radiataPisum sativum7.6933.3385.1474forward
CNT30505774Vigna radiataNicotiana attenuata23.647.4982.38227forward
CNT30710333Vigna radiataGlycine max31.3934.7187.42302forward
CNT3094391Vigna radiataSolanum tuberosum10.0822.283.5197forward
CNT30299761Vigna radiataTriticum aestivum11.0227.2583.96106forward
CNT30395284Vigna radiataTriticum turgidum15.822.0982.24152forward
CNT30554655Vigna radiataOryza glaberrima28.4831.3181.75274forward
CNT30171560Vigna radiataTrifolium pratense29.5235.2480.63284forward
CNT30145745Vigna radiataMedicago truncatula27.6571.3181.2266forward
CNT30246994Vigna radiataAvena sativa26.9231.0279.15259forward
CNT3061459Vigna radiataArabidopsis lyrata24.9540.9679.58240forward
CNT30971Vigna radiataZea mays26.9245.4480.69259forward
CNT30651308Vigna radiataRosa chinensis22.8738.1983.64220forward
CNT30344027Vigna radiataEragrostis tef26.331.3180.63253forward
CNT30477824Vigna radiataArabidopsis halleri20.2758.5680.51195forward
CNT30361538Vigna radiataSorghum bicolor25.2650.180.66243forward
CNT30619829Vigna radiataCajanus cajan29.8329.1190.59287forward
CNT30596768Vigna radiataOryza meridionalis19.5424.0182.45188forward
CNT30358483Vigna radiataLactuca sativa29.8343.8882.93287forward
CNT30370811Vigna radiataOryza glumipatula28.4834.6481.75274forward
CNT30411270Vigna radiataPapaver somniferum29.8351.1680.49287forward
CNT30577354Vigna radiataOryza barthii28.4833.3381.75274forward
CNT30579356Vigna radiataEchinochloa crusgalli28.4831.7980.66274forward
CNT30117312Vigna radiataOryza nivara28.4834.7781.75274forward
CNT30174623Vigna radiataVigna angularis37.2142.0296.09358forward
CNT30113105Vigna radiataFicus carica30.8737.1280.13297forward
CNT3049718Vigna radiataCucumis sativus21.7340.0479.9209forward

Expression of CNT3089114

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MRNEAGGAYISYGCLPVNLTSMGLTFLPIDLKFWPTPWRPGTELLRWGRPCRTGN*

>peptide 2 (36 aa)
RYVWCYYSVTGLMKLKQINIRKDVDESDNKTILKRE*

Sequence

>CNT3089114
AGATATGTGTGGTGTTATTACTCTGTTACAGGTTTGATGAAGTTGAAGCAAATCAATATTCGAAAAGATGTTGATGAGAGTGATAATAAAACAATACTAA
AGAGAGAATAGGAGAAAGAAAATTAAGGCACAGAGTTTAGCATTTGTGGCATAAATTTGAGAATATAAGTACAGAGCATATATGAGGAATGAAGCAGGTG
GTGCTTATATATCATATGGTTGCTTGCCGGTGAACTTGACCTCGATGGGATTAACATTCTTACCAATAGACCTGAAGTTTTGGCCAACCCCTTGGCGTCC
CGGTACTGAACTTCTCCGTTGGGGAAGACCCTGTAGAACTGGTAATTGATCTTGTACTTTGACCTGAGTCTAGTTCCAAGAGCCAAACACTGTTCCTTCC
TGGCCAACTTCAACAGGTTGGGACCCTCCCTCATGATGGCAGCACCCCCAGTGGGCATTTCAAAGATCTGTTCTTTTGGGGACGTCCATGTGATCACATA
GAACTCCTCCACCTGGGCCTTCCTCAAAAGCCCACCGGTGCTGCCTCCGAAGATCGGGGAAGGGGTGTTTGGGTCGAGTTCCGGTGGGGTGAACCCAACG
GGTGCCTCTTTTTTTACGGCCTCTGCGGTTTCATCGGCCGCTGCAGCTCTGATTGTCTTGGAGAACTTGAGGGGCTTGGGAGAGGAGAAGGAGAAGGTGG
GGGATTGCTTCCATGGCACGGAGACACGGTCGGTGGGTTTGAGAGCAGAGAAGGAAGGACTGAAGAGGGAGGCTTGGGTTGCCATGGCCATGCTGAGAAG
GGTTGGGTTGTTGTGTTGTGAGAGATCAGTGAAAAAGAAAAGAAAAGAGATCAAACAAGTATAGGATGAAAAAGATTTTTGATGGGTTGTGTGGATTTCG
ATATGGATAAGTGGATATGCCTTCCACCAATTACAATCAAAGATTTTGATTCATCCTCTTAC