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Detailed information on CNT3049718


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 4e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Cucumis sativusOryza sativa36.9725.280.83193forward
CNT30677834Cucumis sativusSetaria viridis30.6533.7681.25160forward
CNT30522550Cucumis sativusSetaria italica30.6533.6181.25160forward
CNT30639185Cucumis sativusNymphaea colorata5972.1379.87308forward
CNT30517240Cucumis sativusJuglans regia29.1250.3383.55152forward
CNT30376473Cucumis sativusArabidopsis thaliana61.6945.8781.99322forward
CNT30269143Cucumis sativusChenopodium quinoa46.7431.481.56244forward
CNT30380725Cucumis sativusManihot esculenta27.3924.2488.11143forward
CNT30403648Cucumis sativusBeta vulgaris45.5921.4682.35238forward
CNT30630495Cucumis sativusVigna unguiculata58.2453.6279.28304forward
CNT30488386Cucumis sativusOlea europaea28.3520.0881.76148forward
CNT30505774Cucumis sativusNicotiana attenuata33.7236.8282.39176forward
CNT30710333Cucumis sativusGlycine max64.1838.5180.9335forward
CNT3094391Cucumis sativusSolanum tuberosum29.535.2481.82154forward
CNT30298930Cucumis sativusTriticum aestivum28.1617.6980.95147forward
CNT30395284Cucumis sativusTriticum turgidum28.1621.3780.95147forward
CNT3089114Cucumis sativusVigna radiata40.0421.7379.9209forward
CNT30554655Cucumis sativusOryza glaberrima36.9722.0680.83193forward
CNT30171560Cucumis sativusTrifolium pratense43.6828.2985.53228forward
CNT30145740Cucumis sativusMedicago truncatula48.6631.5583.07254forward
CNT30440464Cucumis sativusAegilops tauschii26.4416.6381.16138forward
CNT30666088Cucumis sativusTriticum dicoccoides28.1618.3380.95147forward
CNT3061459Cucumis sativusArabidopsis lyrata58.4352.0583.61305forward
CNT30611231Cucumis sativusArabis alpina24.3322.0982.68127forward
CNT3010182Cucumis sativusZea mays29.1219.3681.58152forward
CNT30651207Cucumis sativusRosa chinensis28.3521.8684.46148forward
CNT30477818Cucumis sativusArabidopsis halleri32.3836.1184.02169forward
CNT30596768Cucumis sativusOryza meridionalis36.9724.6580.31193forward
CNT30356274Cucumis sativusLactuca sativa63.650.9284.04332forward
CNT30370811Cucumis sativusOryza glumipatula36.9724.480.83193forward
CNT30428061Cucumis sativusPapaver somniferum49.8118.1481.92260forward
CNT30570681Cucumis sativusVitis vinifera30.8411.7881.37161forward
CNT3035037Cucumis sativusCucumis melo21.263798.2111forward
CNT30577354Cucumis sativusOryza barthii36.9723.4880.83193forward
CNT30579578Cucumis sativusEchinochloa crusgalli32.9520.980.81172forward
CNT30117312Cucumis sativusOryza nivara36.9724.4980.83193forward
CNT30113105Cucumis sativusFicus carica53.2634.7581.29278forward
CNT30724196Cucumis sativusLupinus angustifolius25.6716.1185.07134forward

Expression of CNT3049718

Peptides detected in this lncRNA

>peptide 1 (33 aa)
WIHLLWINPIFRMQILNFPIRKNPIKLILNLIL*

Sequence

>CNT3049718
CCTGGATTCACCTTCTCTGGATAAACCCCATCTTTAGGATGCAAATACTGAACTTCCCCATTAGGAAAAACCCTATAAAATTGATACTTAATCTTATACT
TTGATCTCAACCTTGTCCCCAAAGCCAAACACTGCTCTTTCCTTGCCAATTTCAGCAGATTCGGCCCTTCTCGCATGATCGCCGCGCCACCGGTCGGCAT
CTCAAAGATTTGCTCTTTAGGGGATTCCCATGTTATGACATAGAATTCCTCCACTTGAGCCTTCCGGAGGAGTCCTCCGGTGCTGCCCGCGAAGATCGGG
GACGGGGTGCTGGGGTCGAGCTCGGGTGGGGAGAATCCGGCCGGAGCCTCGACAGAAGTCTCGGCTTCGGCGGAGACCTTGAAAGAGCGGGAAGAGGAGG
CGGCCTTGAGGTGGGGCTTGGAGTGGAGAGAGATGGGGTGAAGAGGGTGGCTTGAGTGGCCATGGCCATGGGATTTGGAGCAGAGGAAGAGGATTGGGAA
TGGTGGATTGAGAATGGAGGAT