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Detailed information on CNT30665756


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 9e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Triticum dicoccoidesOryza sativa51.4147.6592.88365forward
CNT30639185Triticum dicoccoidesNymphaea colorata36.260.1979.77257forward
CNT30395090Triticum dicoccoidesTriticum turgidum75.3549.77100535forward
CNT30554655Triticum dicoccoidesOryza glaberrima51.4141.7192.88365forward
CNT30440464Triticum dicoccoidesAegilops tauschii74.7963.9899.44531forward
CNT30246994Triticum dicoccoidesAvena sativa52.3944.5595.7372forward
CNT3010182Triticum dicoccoidesZea mays31.6928.6692225forward
CNT30344027Triticum dicoccoidesEragrostis tef50.1444.0693.26356forward
CNT30619829Triticum dicoccoidesCajanus cajan36.3426.1781.4258forward
CNT30370811Triticum dicoccoidesOryza glumipatula51.4146.1492.88365forward
CNT30148662Triticum dicoccoidesBrachypodium distachyon44.7941.392.14318forward
CNT30577354Triticum dicoccoidesOryza barthii51.4144.492.88365forward
CNT30579362Triticum dicoccoidesEchinochloa crusgalli52.2542.5592.99371forward
CNT30117312Triticum dicoccoidesOryza nivara51.4146.3292.88365forward
CNT30113105Triticum dicoccoidesFicus carica36.3432.2583.72258forward

Expression of CNT30665756

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

>peptide 2 (43 aa)
MAMAVALQARWFLAREEMGGGAEATRARGRWGCVWWVMSRRDG*

Sequence

>CNT30665756
TCATCATCAAATTACCATGTACATATAACCTGATGCATCATTATCACCGATCGAATCCATCATTCAAACTCGACAATTAAAATTACAGGACGTCCATCAT
CATCGCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGAC
CTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGG
AGGTACTGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGGCGGTTGCCGAGGGCGAGGCACTGCTCCTTGC
GGGCGAGCTTGAGGAGGTTGGGCCCCTCGCGCATGATGGCGGCGCCGCCAGTGGGCATCTCGAAGACCTGCTCCTTGGGGGAGGTCCAGGTGATGACGTA
GAACTCCTCGACCTGGGCCTTGCGGAGGAGGCCGCGGTGATCAGGTGGCGCGTCGCCGCCGAGGCTTGCGTGGCCATGGCCATGGCGGTGGCGCTCCAAG
CTCGGTGGTTCTTGGCGAGAGAGGAGATGGGGGGAGGAGCCGAGGCCACACGCGCGCGCGGGAGATGGGGTTGTGTCTGGTGGGTGATGAGTAGGAGAGA
TGGCTGAGCT