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Detailed information on CNT30710333


BLAST search results

BLAST vs Swiss-Prot:
sp|P29302|PSAD_NICSY, E-value = 5e-100

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Glycine maxOryza sativa36.4441.3882.65317forward
CNT30639185Glycine maxNymphaea colorata35.5272.3786.08309forward
CNT30515273Glycine maxJuglans regia44.946184.14391forward
CNT30376473Glycine maxArabidopsis thaliana45.0655.8479.59392forward
CNT30380725Glycine maxManihot esculenta35.0651.6984.92305forward
CNT30403648Glycine maxBeta vulgaris27.1321.2884.32236forward
CNT30525887Glycine maxPhaseolus vulgaris15.7536.6386.13137forward
CNT30630888Glycine maxVigna unguiculata31.8440.9291.7277forward
CNT30488386Glycine maxOlea europaea22.0726.0582.29192forward
CNT30505774Glycine maxNicotiana attenuata28.1651.2683.67245forward
CNT30395090Glycine maxTriticum turgidum35.5228.7481.55309forward
CNT3089114Glycine maxVigna radiata44.0239.8185.64383forward
CNT30554655Glycine maxOryza glaberrima36.4436.2382.65317forward
CNT30145793Glycine maxMedicago truncatula49.270.6381.31428forward
CNT30440464Glycine maxAegilops tauschii35.5237.2380.91309forward
CNT30246994Glycine maxAvena sativa34.8336.2982.84303forward
CNT3061459Glycine maxArabidopsis lyrata44.4866.0480.1387forward
CNT30344027Glycine maxEragrostis tef34.0236.6381.76296forward
CNT30619829Glycine maxCajanus cajan5044.1289.43435forward
CNT30596794Glycine maxOryza meridionalis22.9930.1784.5200forward
CNT30356274Glycine maxLactuca sativa48.6264.8882.74423forward
CNT30370811Glycine maxOryza glumipatula36.4440.0882.65317forward
CNT30410573Glycine maxPapaver somniferum39.6638.3882.32345forward
CNT30570681Glycine maxVitis vinifera31.1519.8284.5271forward
CNT30148662Glycine maxBrachypodium distachyon31.7235.8479.35276forward
CNT30577354Glycine maxOryza barthii36.4438.5682.65317forward
CNT30579362Glycine maxEchinochloa crusgalli36.4436.3582.65317forward
CNT30117312Glycine maxOryza nivara36.4440.2382.65317forward
CNT30174623Glycine maxVigna angularis31.8432.5189.53277forward
CNT30113105Glycine maxFicus carica44.9448.8884.91391forward
CNT30725909Glycine maxLupinus angustifolius29.6645.9187.21258forward
CNT3049718Glycine maxCucumis sativus38.5164.1880.9335forward

Expression of CNT30710333

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MQLAQIIITKIAKKKCKIKVQSLSNICGIIKLTIGT*

Sequence

>CNT30710333
TGAAGCAAATCAATATTAATCCAAACCATGCAGTTGGCACAAATAATAATCACCAAAATAGCGAAAAAGAAGTGTAAAATTAAGGTACAGAGTTTAAGCA
ATATTTGTGGCATAATAAAATTGACAATAGGTACATGATATCACATGAGAATATATAGCATATAAAGGAAGCACGGGGGATGATGATGATGAAGATAGAG
TTGTGTGCTCACAAATCATAGGGCTGCTTGCCAGTGAACTTGACCTCAATAGGACTAACATTCTTACCAATAGACCTGAAGTTTTGACCCACCCCTTGGC
GTCCGGCGTTGACCTTCTCAGGGTAAACACCATCCTTAGGGTGCAAATACTGAACCTCCCCATTAGGGAAGACCCTGTAGAACTGGTACTTGATCTTGTA
CTTGGACCTGAGCCTAGTCCCAAGAGCCAAGCACTGCTCCTTCCTGGCCAACTTGAGAAGGTTAGGACCCTCCCTCATGATAGCGGCGCCGCCAGTGGGC
ATTTCAAAGATCTGTTCTTTGGGTGAGTCCCACGTAATGACATAAAACTCCTCCACCTGTGCCTTGCGCAGGAGCCCGCCGGTGCTGCCCCCGAAGATCG
GGGAAGGGGTGTTTGGGTCAAGTTCTGGTGGGGTGAACCCGACCGGTGCAGCCTCTACTTTTGCTGGTGCCTCTGTGGTCTCGTCGGCGGCTGCTGCTCT
GATTGTTCTGGAGAACTTGAGGGGCTTGGGTTGCCATTGCCATGGTTGCTTGAGACAATACAAGTGTTGGGGTTGTCAGAGAGAGAGAGAGAGTAAAGTA
GGAGATTTTGGATGTGGATATGGATAAGGTGATATGCCTTGGACCAATTACAATCTCATATTCCCTTACC