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Detailed information on CNT30440464


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 3e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Aegilops tauschiiOryza sativa5054.1892.53415forward
CNT30678303Aegilops tauschiiSetaria viridis23.4954.7893.33195forward
CNT30522020Aegilops tauschiiSetaria italica34.2259.9294.72284forward
CNT30639185Aegilops tauschiiNymphaea colorata35.368.6278.84293forward
CNT30517240Aegilops tauschiiJuglans regia11.0830.4682.6192forward
CNT30630495Aegilops tauschiiVigna unguiculata17.5925.7580.82146forward
CNT30710333Aegilops tauschiiGlycine max37.2335.5280.91309forward
CNT30299532Aegilops tauschiiTriticum aestivum38.3162.35100318forward
CNT30395090Aegilops tauschiiTriticum turgidum69.453.5899.48576forward
CNT30554655Aegilops tauschiiOryza glaberrima5047.4392.53415forward
CNT30246994Aegilops tauschiiAvena sativa50.2449.9495.2417forward
CNT30665756Aegilops tauschiiTriticum dicoccoides63.9874.7999.44531forward
CNT30446699Aegilops tauschiiSaccharum spontaneum28.0725.9889.7233forward
CNT30971Aegilops tauschiiZea mays33.6148.9591.76279forward
CNT30228866Aegilops tauschiiAnanas comosus27.4726.0985.09228forward
CNT30651308Aegilops tauschiiRosa chinensis16.2723.4482.22135forward
CNT30344027Aegilops tauschiiEragrostis tef47.5948.8992.66395forward
CNT30361538Aegilops tauschiiSorghum bicolor30.7252.5888.24255forward
CNT30619829Aegilops tauschiiCajanus cajan38.1932.1581.39317forward
CNT30596794Aegilops tauschiiOryza meridionalis35.344.1993.52293forward
CNT30358694Aegilops tauschiiLactuca sativa16.3930.5683.09136forward
CNT30370811Aegilops tauschiiOryza glumipatula5052.4792.53415forward
CNT30148662Aegilops tauschiiBrachypodium distachyon38.3141.392.14318forward
CNT30577354Aegilops tauschiiOryza barthii5050.4992.53415forward
CNT30579362Aegilops tauschiiEchinochloa crusgalli50.1247.7192.31416forward
CNT30499040Aegilops tauschiiDigitaria exilis22.7727.7993.12189forward
CNT30117312Aegilops tauschiiOryza nivara5052.6692.53415forward
CNT30558912Aegilops tauschiiPanicum hallii8.0726.0797.0167forward
CNT30113105Aegilops tauschiiFicus carica36.1437.583.33300forward
CNT3049718Aegilops tauschiiCucumis sativus16.6326.4481.16138forward

Expression of CNT30440464

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

>peptide 2 (37 aa)
MAMAVALQARWSLARERRWGEERRPHARAGDGVVSGG*

Sequence

>CNT30440464
CATCAAATTACCATGTACATATAACCTGATGCATCATTATCACCGATCGAATCCATCATTCAAACTCGACAATTAAAATTACAGGACGTCCATCATCATC
GCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGACCTCG
ATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGT
ACTGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGGCGGTTGCCGAGGGCGAGGCACTGCTCCTTGCGGGC
GAGCTTGAGGAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCGGTGGGCATCTCGAACACCTGCTCCTTGGGGGAGGTCCAGGTGATGACGTAGAAC
TCCTCGACCTGGGCCTTGCGGAGGAGGCCGCCCGTGCTGCCGCCGAAGATCGGGGACGGGGTGGACGGGTCCAGCTGCGGCGGCACGAAGCCCGCGGGGG
CGGGCTCCGCCGGCGGCGCGGCGGGGGCGGGGGTGTCCGGGGCCGCGGCGCAGAGCGGGGCCGGGCCGCGGTGATCAGGTGGCGCGTCGCCGCCGAGGCT
TGCGTGGCCATGGCCATGGCGGTGGCGCTCCAAGCTCGGTGGTCCTTGGCGCGAGAGAGGAGATGGGGAGAGGAGCGGAGGCCACACGCGCGCGCGGGAG
ATGGAGTGGTGTCTGGTGGGTGATGAGTAG