Detailed information on CNT30515273


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 1e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Juglans regiaOryza sativa43.3736.2980.22278forward
CNT30639185Juglans regiaNymphaea colorata41.0361.5983.27263forward
CNT30269143Juglans regiaChenopodium quinoa40.8733.7281.3262forward
CNT30380725Juglans regiaManihot esculenta55.236086.16354forward
CNT30525887Juglans regiaPhaseolus vulgaris16.5428.3483.02106forward
CNT30630495Juglans regiaVigna unguiculata46.0252.0383.39295forward
CNT30488386Juglans regiaOlea europaea32.9228.6381.52211forward
CNT30505774Juglans regiaNicotiana attenuata34.7946.6582.51223forward
CNT30710333Juglans regiaGlycine max6144.9484.14391forward
CNT3089114Juglans regiaVigna radiata40.8727.2382.06262forward
CNT30554655Juglans regiaOryza glaberrima43.3731.7780.22278forward
CNT30145740Juglans regiaMedicago truncatula51.3340.8782.37329forward
CNT3061459Juglans regiaArabidopsis lyrata45.0949.3280.28289forward
CNT30619829Juglans regiaCajanus cajan6139.6684.4391forward
CNT30356274Juglans regiaLactuca sativa57.4156.4480.98368forward
CNT30370811Juglans regiaOryza glumipatula43.3735.1580.22278forward
CNT30410573Juglans regiaPapaver somniferum50.8636.2682.52326forward
CNT30577354Juglans regiaOryza barthii43.3733.8280.22278forward
CNT30579362Juglans regiaEchinochloa crusgalli31.8323.3980.39204forward
CNT30117312Juglans regiaOryza nivara43.3735.2880.22278forward
CNT30113105Juglans regiaFicus carica59.5947.7582.98382forward

Expression of CNT30515273

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MLVWGEFVGFWMGGGNLVLDKVICLGPIRMSAFDTYRSVLSNISALHDKGK

Sequence

>CNT30515273
TTGCCGGTGAACTTGACCTCGATCGGGTTCACATTCTTTCCAATTGACCTGAAGTTCACTCCGACACCTTGACGGCCGGGGTTCACCTTCTCAGGGTAGA
CACCGTCCTTTGGGTGCAAATATTGGACCTCTCCATTTGGGAACACCCTGTAAAACTGGTACTTGATCTTGTACTTAGACCTCAGCCTAGTCCCCAGAGC
CAAGCACTGCTCCTTCCTGGCCAGTTTGAGCAGGTTAGGACCCTGCCTCATAATGGCTGCACCTCCGGTGGGCATCTCAAAGATTTGTTCTTTGGGAGAG
TCCCAAGTGATCACATAAAACTCTTCAACTTGAGCCTTCCGCAGCAGGCCACCAGTGCTGCCGGCGAAAATCGGCGAGGGAGTGCTTGGGTTGCCATGGC
CATGAAGGGCTAGAGATAAGGGGATGATGGTTGGTGCAAGCTGCTTGATAACGGGGATGATGGTTGTGTGGGATCAATAAGGTTGGGGATGTTAGTATGG
GGGGAGTTTGTAGGATTTTGGATGGGTGGTGGGAATTTGGTGTTGGATAAGGTGATATGCCTTGGACCAATTAGGATGTCTGCTTTTGATACGTACCGAT
CGGTCCTCAGCAATATCTCAGCACTTCACGACAAAGGAAAG