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Detailed information on CNT30361391


BLAST search results

BLAST vs Swiss-Prot:
sp|P11143|HSP70_MAIZE, E-value = 2e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696916Sorghum bicolorOryza sativa37.8791.3588.01317forward
CNT30672929Sorghum bicolorSetaria viridis15.2942.6789.84128forward
CNT30522780Sorghum bicolorSetaria italica39.6739.2991.27332forward
CNT30640495Sorghum bicolorNymphaea colorata24.6150.8686.89206forward
CNT30535611Sorghum bicolorEucalyptus grandis25.218.3991211forward
CNT30630063Sorghum bicolorVigna unguiculata18.5226.2381.94155forward
CNT30490395Sorghum bicolorOlea europaea36.0837.8482.45302forward
CNT30121888Sorghum bicolorPhyscomitrium patens32.7416.6779.56274forward
CNT30392820Sorghum bicolorTriticum turgidum44.5648.8989.01373forward
CNT30569551Sorghum bicolorActinidia chinensis23.319.3589.23195forward
CNT30588413Sorghum bicolorMusa acuminata20.7976.9989.08174forward
CNT30510893Sorghum bicolorSolanum lycopersicum8.4834.6388.7371forward
CNT30172487Sorghum bicolorTrifolium pratense24.9764.9184.21209forward
CNT30440539Sorghum bicolorAegilops tauschii19.7131.1990.91165forward
CNT30665093Sorghum bicolorTriticum dicoccoides24.0163.8192.04201forward
CNT3079894Sorghum bicolorBrassica juncea19.9559.8682.63167forward
CNT30613976Sorghum bicolorArabis alpina36.9244.1479.94309forward
CNT30447372Sorghum bicolorSaccharum spontaneum37.2898.1193.91312forward
CNT30143339Sorghum bicolorLolium perenne19.5943.6290.85164forward
CNT301752Sorghum bicolorZea mays28.3290.895.36237forward
CNT30231843Sorghum bicolorAnanas comosus7.6527.3592.1964forward
CNT3067065Sorghum bicolorLeersia perrieri19.8339.0693.37166forward
CNT30625111Sorghum bicolorDaucus carota36.0829.8479.14302forward
CNT30621132Sorghum bicolorCajanus cajan22.131.6283.78185forward
CNT30369286Sorghum bicolorOryza glumipatula33.8147.492.23283forward
CNT30154479Sorghum bicolorPrunus persica24.8547.9383.65208forward
CNT3056582Sorghum bicolorAmborella trichopoda16.9722.0284.51142forward
CNT3024414Sorghum bicolorPopulus trichocarpa24.9768.5282.3209forward
CNT30151237Sorghum bicolorBrachypodium distachyon19.8331.3289.76166forward
CNT30578076Sorghum bicolorOryza barthii50.6652.7487.03424forward
CNT30496988Sorghum bicolorDigitaria exilis39.4334.5287.88330forward
CNT30115466Sorghum bicolorOryza nivara11.3534.394.7495forward
CNT30112113Sorghum bicolorFicus carica5.521.395.6546forward

Expression of CNT30361391

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MLPHPDARVGRAEVDADRRPVSLSGHGETLSSRVSGRCWGKEYLLDSPGQRVRGGGIEEESVD

>peptide 2 (76 aa)
MPPAMSGPAAPWYILAMMGLQMPSSSFILSSNSSTSASWLLSSQLMAPSMASSIFFLSASGSLEAILSSLMVLRML*

>peptide 3 (47 aa)
MPIAGPSPFPAMERRSRREYRGDVGEKNIYWTRRVSAYAVEELRRNRW

Sequence

>CNT30361391
GGGGCCCGATGAATGGCCAAAAAGGAAAATGCATGAAAAGAGTACTAGGATCCAGTTTGTAATTATTTAATAAGCAAAACTATCAAAATTCCTCATTTAG
TCGACTTCTTCGATCTTGGGGCCAGCACCACTGCCACCAGCCGGCGGAGCATCCTGATCCATGCCACCGGCCATGTCAGGACCAGCAGCGCCCTGGTACA
TCTTGGCGATGATGGGGTTGCAGATGCCCTCCAGCTCCTTCATCTTGTCCTCAAACTCGTCGACCTCGGCGAGCTGGTTGTTGTCGAGCCAATTAATGGC
CCCCTCGATGGCGTCATCAATCTTCTTCTTGTCGGCCTCCGGGAGCTTGGAGGCGATCTTGTCGTCCCTGATGGTGTTGCGCATGTTGTAGGCGTAGTTC
TCGAGCGAGTTCTTGGCGTCCACCTTCTTCTTGTGCTCCTCGTCCTCGGCCTTGTACTTCTCTGCCTCCTGCACCATCTTCTCGATCTCCTCTTTGCTCA
GCCGGCCCTTGTCGTTGACGGTGTTGATGGGGTTCATGGCGACCTGATTCTTGGCGGCGTCGCCGACGAGCCTCTCGGAGTCGGTGAAGGCGACATACGA
CGGCGTCGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACTCGGTCATGCTGCCACACCCCGACGCACGAGTAGGTCGTGCCGAGGTCGATGCCGATC
GCCGGCCCGTCTCCCTTTCCGGCCATGGAGAGACGCTCTCGTCGAGAGTATCGGGGAGATGTTGGGGAAAAGAATATCTACTGGACTCGCCGGGTCAGCG
CGTACGCGGTGGAGGAATTGAGGAGGAATCGGTGGAC