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Detailed information on CNT30621132


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LHA8|HS704_ARATH, E-value = 5e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697339Cajanus cajanOryza sativa23.0831.8486.67135forward
CNT30672564Cajanus cajanSetaria viridis25.327.5685.14148forward
CNT30520958Cajanus cajanSetaria italica27.1811.4185.53159forward
CNT30535317Cajanus cajanEucalyptus grandis25.1325.9388.44147forward
CNT30515289Cajanus cajanJuglans regia16.7520.4687.7698forward
CNT30616016Cajanus cajanSesamum indicum17.4433.8989.22102forward
CNT30381739Cajanus cajanManihot esculenta58.847.2578.49344forward
CNT30630063Cajanus cajanVigna unguiculata61.7161.0886.7361forward
CNT30490395Cajanus cajanOlea europaea27.6920.389.51162forward
CNT30283475Cajanus cajanTriticum aestivum46.1534.4880.37270forward
CNT30224417Cajanus cajanHordeum vulgare14.8722.7789.6687forward
CNT30392820Cajanus cajanTriticum turgidum20.3415.688.24119forward
CNT30568743Cajanus cajanActinidia chinensis13.525.3288.6179forward
CNT30588413Cajanus cajanMusa acuminata23.9361.9584.29140forward
CNT30510893Cajanus cajanSolanum lycopersicum17.9551.2289.52105forward
CNT30441947Cajanus cajanAegilops tauschii23.0817.7288.89135forward
CNT30613976Cajanus cajanArabis alpina24.4420.4388.81143forward
CNT30450032Cajanus cajanSaccharum spontaneum20.3414.8688.24119forward
CNT305922Cajanus cajanZea mays13.6821.887.580forward
CNT30231843Cajanus cajanAnanas comosus14.3635.985.7184forward
CNT3067065Cajanus cajanLeersia perrieri20.342885.71119forward
CNT30625111Cajanus cajanDaucus carota22.3912.9487.79131forward
CNT30361391Cajanus cajanSorghum bicolor31.6222.183.78185forward
CNT30369874Cajanus cajanOryza glumipatula17.0922.5288100forward
CNT30154479Cajanus cajanPrunus persica16.9222.8191.9299forward
CNT30572753Cajanus cajanVitis vinifera21.378.984.8125forward
CNT30151237Cajanus cajanBrachypodium distachyon20.3422.4588.24119forward
CNT30578217Cajanus cajanOryza barthii23.0830.0788.89135forward
CNT30112153Cajanus cajanFicus carica59.4938.6779.89348forward

Expression of CNT30621132

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MPPAMSGAPAPWYILAMIGLQMLSSSFTLSSNSSASASWFPSNH*

>peptide 2 (56 aa)
KDLANKIVSFIKMIFKQSIHPSRRKLDKVSKNTKTALTITITHVCTEKKVGQYSKT*

>peptide 3 (46 aa)
MSVPKKKLANILKHKNNKLPKTIDPSKSKNNLINFFDLGASTTGSR*

Sequence

>CNT30621132
CAAAGACTTGGCCAATAAAATTGTTTCCTTTATCAAAATGATTTTTAAACAAAGTATTCATCCATCCAGGAGAAAACTGGATAAAGTATCCAAAAACACA
AAAACAGCATTAACAATAACAATAACCCATGTCTGTACCGAAAAAAAAGTTGGCCAATATTCTAAAACATAAAAACAATAAATTACCCAAAACAATAGAT
CCGTCTAAGTCAAAAAATAATTTAATCAACTTCTTCGATCTTGGGGCCAGCACCACCGGCTCCAGATGATGGAACATCTTCATCCATGCCTCCAGCCATG
TCAGGAGCACCTGCACCCTGGTACATCTTGGCAATGATTGGGTTGCAAATGCTCTCCAGCTCCTTCACCTTGTCTTCGAACTCATCTGCCTCCGCAAGCT
GGTTTCCATCCAACCACTGAATGGCATAGTTCTCCAAACCGTTCTTTGCATCCACCTTCTTCTTGTGTTCCTCATCCTCAGCCTTGTACTTCTCTGCCTC
CTGAACCATCTTCTCGATCTCGTCCTTTGAGAGTCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGCCCTGTTGTCTTG