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Detailed information on CNT30665093


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697157Triticum dicoccoidesOryza sativa34.9249.5592.73110forward
CNT30520761Triticum dicoccoidesSetaria italica35.2443.0295.5111forward
CNT30640495Triticum dicoccoidesNymphaea colorata64.4450.1286.7203forward
CNT30535611Triticum dicoccoidesEucalyptus grandis63.177.9294.97199forward
CNT30295130Triticum dicoccoidesTriticum aestivum35.249.9691.89111reverse complement
CNT30224773Triticum dicoccoidesHordeum vulgare35.5645.7198.21112forward
CNT30394412Triticum dicoccoidesTriticum turgidum83.1730.6496.95262forward
CNT30569551Triticum dicoccoidesActinidia chinensis59.0518.4586.56186forward
CNT30552909Triticum dicoccoidesOryza glaberrima33.3338.1891.43105forward
CNT30172487Triticum dicoccoidesTrifolium pratense59.3758.0784.49187forward
CNT30440625Triticum dicoccoidesAegilops tauschii80.3290.0498.02253forward
CNT3079894Triticum dicoccoidesBrassica juncea59.3767.0382.89187forward
CNT30449535Triticum dicoccoidesSaccharum spontaneum64.7649.5196.57204forward
CNT30143339Triticum dicoccoidesLolium perenne52.744.1593.37166forward
CNT301752Triticum dicoccoidesZea mays62.2275.191.33196forward
CNT30625786Triticum dicoccoidesDaucus carota4014.7590.48126forward
CNT30685689Triticum dicoccoidesTriticum urartu47.9458.53100151forward
CNT30479018Triticum dicoccoidesArabidopsis halleri46.3545.282.19146forward
CNT30361391Triticum dicoccoidesSorghum bicolor63.8124.0192.04201forward
CNT30369767Triticum dicoccoidesOryza glumipatula43.4953.3193.43137forward
CNT3024414Triticum dicoccoidesPopulus trichocarpa59.6861.6481.38188forward
CNT30578215Triticum dicoccoidesOryza barthii35.5615.6491.96112forward
CNT30115466Triticum dicoccoidesOryza nivara31.4335.7493.9499forward
CNT30112113Triticum dicoccoidesFicus carica17.7825.9394.6456forward

Expression of CNT30665093

Peptides detected in this lncRNA

>peptide 1 (53 aa)
KTVLMGFMATWFLAASPMRRSESVKATYEGVVRLPWSLAMISTRSCCHTPTHE*

>peptide 2 (75 aa)
EDGVDGVHGDLVLGGIADEALRVGEGDVRGRGAVALVVGDDLDAVVLPHADARVGGAEVDADGRPLALGRRHGSS*

Sequence

>CNT30665093
CGAAGACGGTGTTGATGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCGCCGATGAGGCGCTCCGAGTCGGTGAAGGCGACGTACGAGGGCGTGGTGCG
GTTGCCCTGGTCGTTGGCGATGATCTCGACGCGGTCGTGCTGCCACACGCCGACGCACGAGTAGGTGGTGCCGAGGTCGATGCCGATGGCCGGCCCCTCG
CCCTTGGTCGGCGCCATGGCTCTAGCTAGATCGAGAAGAAGGAAGCTAAGCTAGGACTAGGGTTAGGGTTTGAGGAGCCTTTGCGCAGCTGCTGGCGGCG
GCTGCTGCGGACTCG