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Detailed information on CNT30154479


BLAST search results

BLAST vs Swiss-Prot:
sp|P22953|HS701_ARATH, E-value = 8e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696916Prunus persicaOryza sativa45.8557.3586.43199forward
CNT30672831Prunus persicaSetaria viridis19.1227.9590.3683forward
CNT30522780Prunus persicaSetaria italica48.1624.7384.21209forward
CNT30535611Prunus persicaEucalyptus grandis49.548.5584.65215forward
CNT30515289Prunus persicaJuglans regia48.8544.2681.6212forward
CNT30630063Prunus persicaVigna unguiculata24.1917.7787.62105forward
CNT30490395Prunus persicaOlea europaea49.3126.8281.31214forward
CNT30121888Prunus persicaPhyscomitrium patens43.3211.4479.79188forward
CNT30283475Prunus persicaTriticum aestivum20.7411.4993.3390forward
CNT30394412Prunus persicaTriticum turgidum49.7725.2684.72216forward
CNT30510806Prunus persicaSolanum lycopersicum22.1233.2289.5896forward
CNT30440539Prunus persicaAegilops tauschii23.519.2890.2102forward
CNT30613976Prunus persicaArabis alpina47.9329.7184.62208forward
CNT30451043Prunus persicaSaccharum spontaneum46.0823.4782200forward
CNT30138690Prunus persicaLolium perenne44.0139.8784.29191forward
CNT305922Prunus persicaZea mays44.4752.5984.46193forward
CNT30625111Prunus persicaDaucus carota25.3510.8790.91110forward
CNT30361391Prunus persicaSorghum bicolor47.9324.8583.65208forward
CNT30621132Prunus persicaCajanus cajan22.8116.9291.9299forward
CNT30369286Prunus persicaOryza glumipatula36.6426.6385.53159forward
CNT30572753Prunus persicaVitis vinifera23.737.3387.38103forward
CNT3056582Prunus persicaAmborella trichopoda26.0417.5284.07113forward
CNT30578076Prunus persicaOryza barthii48.162686.6209forward
CNT30496988Prunus persicaDigitaria exilis32.9514.9685.31143forward
CNT30112153Prunus persicaFicus carica21.8910.5691.5895forward

Expression of CNT30154479

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MIGLQMLSNSFILSSNSSASASWLLSSHWMAVSIESSIFFLSAGGNLAPIFSSLMVFLML*

Sequence

>CNT30154479
CCCCGGTGCAAAGAGATCCAGGAAAAAATACCACGGTGCCTATAGGTTCCGCAAATTAAAAAAGAAACTTAAAGGCCTTGATAAATAACTTCCAAGGCAA
AAATATGAAGAAAAAAAAACATAAAAATATTCAGTTCAAAAACACCTAAAATTCCGAAATTAAATTCAACCCCAGCAGAAATTTAGTCGACTTCCTCAAT
CTTGGGGCCAGCACCGTCAGCACCAGCACCCTGGTACATCTTGGCGATGATTGGGTTGCAGATGCTCTCCAACTCCTTCATCTTGTCTTCGAACTCATCG
GCCTCTGCGAGCTGGTTGCTGTCGAGCCACTGGATGGCGGTTTCGATCGAGTCTTCGATCTTCTTCTTGTCAGCTGGCGGCAACTTGGCTCCGATCTTCT
CGTCCTTGATGGTGTTCCTCATGTTGTAGGCATA