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Detailed information on CNT30440539


BLAST search results

BLAST vs Swiss-Prot:
sp|P16121|HSP70_LUPPO, E-value = 8e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30121888Aegilops tauschiiPhyscomitrium patens23.447.5484.68124forward
CNT30568743Aegilops tauschiiActinidia chinensis15.1225.6491.2580forward
CNT305922Aegilops tauschiiZea mays15.1221.89580forward
CNT3067065Aegilops tauschiiLeersia perrieri33.0841.1888.57175forward
CNT30625111Aegilops tauschiiDaucus carota31.7616.683.33168forward
CNT30361391Aegilops tauschiiSorghum bicolor31.1919.7190.91165forward
CNT30369286Aegilops tauschiiOryza glumipatula33.6529.8290.45178forward
CNT30154479Aegilops tauschiiPrunus persica19.2823.590.2102forward

Expression of CNT30440539

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MFQPARNNSDHSERNNNHHNLKSRIRDDIIITSSRLRRLHHITSTV*

>peptide 2 (33 aa)
DIVAHLIHECSNPHGITRTTRSETITITTSSLG*

>peptide 3 (53 aa)
MPPSMSAPAPWYILAMMGLHRASSSFILSSNSSASASWFAIFSSLMVLRMLYE*

Sequence

>CNT30440539
GTGACATCGTGGCCCATTTAATCCACGAATGTTCCAACCCGCACGGAATAACTCGGACCACTCGGAGCGAAACAATAACCATCACAACCTCAAGTCTCGG
ATAAGAGACGACATAATAATAACTAGCAGCAGGCTTCGTCGCCTCCACCACATAACATCGACTGTTTAGTCCACCTCCTCAATCTTGGGGCCGGGGCCGC
CGGACGCAGCTGGGGTGTCGTCGTCCATGCCGCCCTCCATGTCAGCACCAGCACCCTGGTACATCTTGGCGATGATGGGGTTGCACAGGGCCTCCAGCTC
CTTCATCTTGTCCTCGAACTCGTCCGCCTCAGCGAGCTGGTTCGCGATCTTCTCGTCCTTGATGGTGTTGCGCATGTTGTACGAGTAGTTCTCCAGGGCG
TTCTTGGACTCCACCTTCTTCTTGTGCTCCTCGTCCTCGGACTTGTACTTCTCAGCTTCCTGGACCATCTTCTCGATCTCCTCCTTGCTCAGCCTGCCCT
TGTCGTTGGTGATGGTGATCTTGTTCTTC