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Detailed information on CNT30496988


BLAST search results

BLAST vs Swiss-Prot:
sp|P27322|HSP72_SOLLC, E-value = 8e-106

BLAST vs NONCODE:
NONVVIT003131, E-value = 5e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696916Digitaria exilisOryza sativa31.5987.0389.74302forward
CNT30673056Digitaria exilisSetaria viridis24.487594.44234forward
CNT30520958Digitaria exilisSetaria italica53.0336.3789.55507forward
CNT30535317Digitaria exilisEucalyptus grandis47.2879.7285.4452forward
CNT30616016Digitaria exilisSesamum indicum15.950.585.53152forward
CNT30381739Digitaria exilisManihot esculenta17.7823.3584.12170forward
CNT30630063Digitaria exilisVigna unguiculata20.9233.8484.5200forward
CNT30490395Digitaria exilisOlea europaea44.1452.8881.28422forward
CNT30168984Digitaria exilisPistacia vera6.820.3187.6965forward
CNT30121888Digitaria exilisPhyscomitrium patens28.6616.6781.02274forward
CNT30283475Digitaria exilisTriticum aestivum35.7743.6888.01342forward
CNT30224417Digitaria exilisHordeum vulgare9.4123.5691.1190forward
CNT30383257Digitaria exilisTriticum turgidum42.8962.0389.51410forward
CNT30568743Digitaria exilisActinidia chinensis8.3725.649080forward
CNT30588413Digitaria exilisMusa acuminata19.9884.5185.86191forward
CNT30510893Digitaria exilisSolanum lycopersicum10.0446.8387.596forward
CNT30441947Digitaria exilisAegilops tauschii39.855088.45381forward
CNT30613976Digitaria exilisArabis alpina45.0861.5783.06431forward
CNT30450032Digitaria exilisSaccharum spontaneum54.0864.5493.42517forward
CNT30138690Digitaria exilisLolium perenne23.1246.1486.88221forward
CNT305922Digitaria exilisZea mays22.759.1394.93217forward
CNT30231854Digitaria exilisAnanas comosus26.9995.5687.6258forward
CNT3067065Digitaria exilisLeersia perrieri18.4141.4186.93176forward
CNT30625111Digitaria exilisDaucus carota34.8332.9179.28333forward
CNT30685597Digitaria exilisTriticum urartu94391.8686forward
CNT30361391Digitaria exilisSorghum bicolor34.5239.4387.88330forward
CNT30595552Digitaria exilisOryza meridionalis9.3139.3892.1389forward
CNT30369286Digitaria exilisOryza glumipatula30.9649.5888.18296forward
CNT30154479Digitaria exilisPrunus persica14.9632.9585.31143forward
CNT3056582Digitaria exilisAmborella trichopoda14.8522.0281.69142forward
CNT30151237Digitaria exilisBrachypodium distachyon22.2840.1989.67213forward
CNT30578076Digitaria exilisOryza barthii45.9254.688.84439forward
CNT30582481Digitaria exilisEchinochloa crusgalli9.9420.3995.7995forward
CNT30550306Digitaria exilisOryza brachyantha10.8825.6891.35104forward

Expression of CNT30496988

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MVILFFWPVVLSSAETLRMPLASMSKHTVIWGTPRGAGGMPESSNLPRRLLSRVLVRSPSYTWINTPGWLSEHFSTGSMHFLKRSMLSSSNLARV

>peptide 2 (77 aa)
MPAAPPMSAPAPWYILAMMGLHRLSSSFILSSNSSASASWLASSQLMAASMASSIFFLSSAASLEAIFSSRIVLRML*

Sequence

>CNT30496988
CGAGCAGAGATTACCGAATAATACCGTATTACTTAAACGCTTGATCAAACAATCAAGCCAGCAATAAATTTGTTCACCAGACACTACCATCCAACCGACC
GACCATCACGAGGTCGAAAAATTACCACCACAAAGTAGCAACCGACCAACCACAGATTTAAGTTCGATACAGCACAGAACATAAAACGATAACTCAGCAG
CAGCAGAGAGGCACCCGCCACCGCATCCCGACGACGAGACGAGTCGCTTAGTCAACCTCCTCGATCTTGGGGCCAGGGCCGCCGCTGCCCGCTGGTGCAT
CCTCGTCCATGCCGGCGGCGCCACCCATGTCCGCTCCGGCGCCCTGGTACATCTTGGCGATGATGGGGTTGCACAGGCTCTCCAGCTCCTTCATCTTGTC
CTCGAACTCGTCCGCCTCGGCGAGCTGGTTGGCGTCCAGCCAGCTGATGGCCGCGTCGATGGCATCCTCGATCTTCTTCTTGTCGTCGGCCGCCAGCTTG
GAGGCGATCTTCTCGTCGCGGATCGTGTTGCGCATGTTGTAGGCGTAGTTCTCCAGAGAGTTCTTGGACTCGACCTTCTTCTTGTGCTCCTCGTCCTCCG
ACTTGTACTTCTCGGCATCCTGGACCATCTTCTCGATCTCCTCCTTGGACAGGCGGCCCTTGTCGTTGGTGATGGTGATCTTGTTCTTCTGGCCGGTGGT
CTTGTCCTCGGCAGAGACGTTGAGGATGCCGTTGGCGTCGATGTCGAAGCATACCGTGATCTGGGGGACACCACGGGGGGCAGGGGGGATGCCGGAGAGC
TCGAACTTGCCAAGGAGGTTGTTGTCGCGGGTCCTGGTCCGCTCACCCTCGTACACCTGGATCAACACACCGGGCTGGTTGTCGGAGCACTTCTCTACTG
GCTCCATGCACTTCCTGAAGAGGTCCATGTTGAGCTCCTCAAACCTGGCACGGGTG