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Detailed information on CNT30630063


BLAST search results

BLAST vs Swiss-Prot:
sp|O65719|HSP7C_ARATH, E-value = 2e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697339Vigna unguiculataOryza sativa30.842.9288.46182forward
CNT30673056Vigna unguiculataSetaria viridis33.8464.184200forward
CNT30520958Vigna unguiculataSetaria italica35.8715.2183.02212forward
CNT30535317Vigna unguiculataEucalyptus grandis40.6142.3387.08240forward
CNT30616016Vigna unguiculataSesamum indicum34.8668.4486.89206forward
CNT30381739Vigna unguiculataManihot esculenta39.9332.4286.44236forward
CNT30490395Vigna unguiculataOlea europaea42.6431.5888.1252forward
CNT30283475Vigna unguiculataTriticum aestivum35.8727.0881.13212forward
CNT30224417Vigna unguiculataHordeum vulgare14.5522.5188.3786forward
CNT30394244Vigna unguiculataTriticum turgidum42.9833.5585.83254forward
CNT30591655Vigna unguiculataMusa acuminata1129.5590.7765forward
CNT30510893Vigna unguiculataSolanum lycopersicum17.0949.2786.14101forward
CNT30145283Vigna unguiculataMedicago truncatula18.131.288.79107forward
CNT30441947Vigna unguiculataAegilops tauschii42.9833.3386.22254forward
CNT30613976Vigna unguiculataArabis alpina35.8730.2985.38212forward
CNT30450032Vigna unguiculataSaccharum spontaneum31.9823.683.6189forward
CNT305922Vigna unguiculataZea mays13.7122.0785.1981forward
CNT30231854Vigna unguiculataAnanas comosus31.987079.89189forward
CNT30361391Vigna unguiculataSorghum bicolor26.2318.5281.94155forward
CNT30621132Vigna unguiculataCajanus cajan61.0861.7186.7361forward
CNT30154479Vigna unguiculataPrunus persica17.7724.1987.62105forward
CNT30151237Vigna unguiculataBrachypodium distachyon26.7329.8186.08158forward
CNT30578217Vigna unguiculataOryza barthii39.4251.8987.55233forward
CNT30496988Vigna unguiculataDigitaria exilis38.9224.0683.91230forward
CNT30112153Vigna unguiculataFicus carica45.8530.1185.61271forward

Expression of CNT30630063

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKTSKQFNQLLRSWDQHHQTQMVEHLHPCLQPCREHLHPGTSLQ*

>peptide 2 (44 aa)
MPPAMSGAPAPWYIFAMIGLQMLSSSFILSSNSSASASWLLSNQ*

>peptide 3 (41 aa)
MNSTLNGIIFQGILCINLLLVLLILCLVLFSLLDHLLNLVL*

Sequence

>CNT30630063
CCGGACTAGAACAGTGAGAAACCAAAATGTTGGGCCAAAATTCTGAACAAAATATAATAAAGAGAAAAGGTAAATAAGTCCAGCAGAACATGAAAACAAG
TAAACAGTTTAATCAACTTCTTCGATCTTGGGACCAGCACCACCAGACGCAGATGGTGGAACATCTTCATCCATGCCTCCAGCCATGTCGGGAGCACCTG
CACCCTGGTACATCTTTGCAATGATTGGATTGCAAATGCTCTCAAGCTCCTTCATCTTGTCCTCGAACTCATCTGCTTCGGCAAGTTGGTTGCTGTCCAA
CCAATGAATAGCACTCTCAATGGCATAATTTTCCAGGGCATTCTTTGCATCAACCTTCTTCTTGTGCTCCTCATCCTCTGCCTTGTACTTTTCAGCCTCC
TGGACCATCTTCTCAATCTCGTCCTTTGAGAGTCTACCCTTGTCATTGGTAATAGTAATCTTGTTCTTCTGACCGGTGGTCTTGTCCTCGGCTGAGACAT
TCAAGATACCATTGGCATCTATGTCAAAGCAAACGGTGATCTGAGGAACACCCCTGGGTGCAGGGGGAATGCCAGAAAGCTCAAATTTACC