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Detailed information on CNT30369286


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LHA8|HS704_ARATH, E-value = 8e-65

BLAST vs NONCODE:
NONORUT007539, E-value = 2e-89

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696916Oryza glumipatulaOryza sativa46.479.8388.81277forward
CNT30672929Oryza glumipatulaSetaria viridis23.624787.94141forward
CNT30522780Oryza glumipatulaSetaria italica64.1545.3392.43383forward
CNT30535317Oryza glumipatulaEucalyptus grandis49.5852.284.12296forward
CNT30515289Oryza glumipatulaJuglans regia28.1435.0779.76168forward
CNT30617543Oryza glumipatulaSesamum indicum21.2713.9781.1127forward
CNT30490395Oryza glumipatulaOlea europaea43.7232.7181.23261forward
CNT30121888Oryza glumipatulaPhyscomitrium patens20.777.5485.48124forward
CNT30283475Oryza glumipatulaTriticum aestivum23.4517.8894.29140forward
CNT30224417Oryza glumipatulaHordeum vulgare16.0825.1391.6796forward
CNT30383257Oryza glumipatulaTriticum turgidum49.5844.7890.54296forward
CNT30568743Oryza glumipatulaActinidia chinensis11.2221.4791.0467forward
CNT30588413Oryza glumipatulaMusa acuminata31.3282.7490.37187forward
CNT30510893Oryza glumipatulaSolanum lycopersicum30.3288.2983.43181forward
CNT30440539Oryza glumipatulaAegilops tauschii29.8233.6590.45178forward
CNT30613976Oryza glumipatulaArabis alpina23.452088.57140forward
CNT30450032Oryza glumipatulaSaccharum spontaneum49.5836.9589.53296forward
CNT30138690Oryza glumipatulaLolium perenne30.493886.26182forward
CNT305922Oryza glumipatulaZea mays31.6651.588.89189forward
CNT30231843Oryza glumipatulaAnanas comosus14.4136.7588.3786forward
CNT3067065Oryza glumipatulaLeersia perrieri27.8139.0693.37166forward
CNT30625111Oryza glumipatulaDaucus carota43.8925.8980.53262forward
CNT30361391Oryza glumipatulaSorghum bicolor47.433.8192.23283forward
CNT30595552Oryza glumipatulaOryza meridionalis18.4348.67100110forward
CNT30154479Oryza glumipatulaPrunus persica26.6336.6485.53159forward
CNT30108670Oryza glumipatulaOryza longistaminata29.3156.4593.14175forward
CNT30151237Oryza glumipatulaBrachypodium distachyon27.8131.3290.36166forward
CNT30496988Oryza glumipatulaDigitaria exilis49.5830.9688.18296forward

Expression of CNT30369286

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MAPSMASSIFFLSSAESLEAILSSLMVFLML*

>peptide 2 (54 aa)
SEQVQVKPYGDTHFQKLHRTKLSTAKKHRGSHDASHITRFRLPSSRNHVGPPPA*

Sequence

>CNT30369286
TTTCAGAGCAAGTTCAGGTAAAACCATACGGCGATACACACTTCCAAAAGCTTCATCGCACGAAACTCTCGACGGCTAAAAAACACAGGGGATCACACGA
CGCCAGCCACATCACACGGTTCAGACTCCCTTCCAGCCGGAATCACGTAGGACCACCACCAGCTTAATCGACCTCCTCGATCTTGGGGCCTGCACCGCTG
CCACCCGCCGGCGCCTCCTTCATCTTGTCCTCGAACTCGTCCGCCTCCGCGAGCTGGTTGCTGTCGAGCCAGTTGATGGCGCCGTCGATGGCGTCCTCGA
TCTTCTTCTTGTCGTCCGCCGAGAGCTTGGAGGCGATCTTGTCGTCCTTGATGGTGTTCCTCATGTTGTAGGCGTAGTTCTCGAGCGCGTTCTTGGCGTC
CACCTTCTTCTTGTGCTCCTCGTCCTCCGCCTTGTACTTCTCCGCCTCCTGCACCATCTTCTCGATCTCCTCCTTGCTCAGCCTGCCCTTGTCGTTGCAG
ACGGTGATCTGGGGCACGCCGCGGGGAGCTGGAGGGATGCCGGAGAGCTCGAACTTGCCCAGCAGGTTGTTGTCCTTGGTCCGGGCACGCTCACCCT