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Detailed information on CNT30588413


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697339Musa acuminataOryza sativa79.6542.4588.33180forward
CNT30672929Musa acuminataSetaria viridis64.1648.3385.52145forward
CNT30520958Musa acuminataSetaria italica84.5113.791.62191forward
CNT30535317Musa acuminataEucalyptus grandis84.5133.6987.43191forward
CNT30515289Musa acuminataJuglans regia32.7415.4585.1474forward
CNT30616016Musa acuminataSesamum indicum36.7327.5784.3483forward
CNT30490395Musa acuminataOlea europaea79.222.4381.01179forward
CNT30121888Musa acuminataPhyscomitrium patens54.877.5484.68124forward
CNT30283475Musa acuminataTriticum aestivum63.7218.3990.97144forward
CNT30224417Musa acuminataHordeum vulgare42.4825.1386.4696forward
CNT30383257Musa acuminataTriticum turgidum84.5128.989.53191forward
CNT30441947Musa acuminataAegilops tauschii79.6523.6290180forward
CNT30239820Musa acuminataAvena sativa20.818.3691.4947forward
CNT30613976Musa acuminataArabis alpina79.225.5783.24179forward
CNT30450032Musa acuminataSaccharum spontaneum79.6522.4786.11180forward
CNT30138690Musa acuminataLolium perenne26.1112.3289.8359forward
CNT305922Musa acuminataZea mays30.0918.5385.2968forward
CNT30231843Musa acuminataAnanas comosus38.0536.7589.5386forward
CNT3067065Musa acuminataLeersia perrieri76.5540.7190.17173forward
CNT30625111Musa acuminataDaucus carota66.3714.8282.67150forward
CNT30689574Musa acuminataTriticum urartu20.815.6189.3647forward
CNT30361391Musa acuminataSorghum bicolor76.9920.7989.08174forward
CNT30621132Musa acuminataCajanus cajan61.9523.9384.29140forward
CNT30360803Musa acuminataLactuca sativa39.3811.5485.3989forward
CNT30369286Musa acuminataOryza glumipatula82.7431.3290.37187forward
CNT30151237Musa acuminataBrachypodium distachyon79.6533.9688.33180forward
CNT30578217Musa acuminataOryza barthii79.6540.0988.33180forward
CNT30496988Musa acuminataDigitaria exilis84.5119.9885.86191forward
CNT30112153Musa acuminataFicus carica61.9515.5682.86140forward

Expression of CNT30588413

Peptides detected in this lncRNA

>peptide 1 (42 aa)
RRKLGADLVVPDGVPHVVGVVLQGVLRFHLFLVLLVVRLVLL*

Sequence

>CNT30588413
CGGCGAAAGCTTGGAGCTGATCTTGTCGTCCCTGATGGTGTTCCTCATGTTGTAGGCGTAGTTCTCCAGGGCGTTCTTCGCTTCCACCTTTTTCTTGTGC
TCCTCGTCGTCCGCCTTGTACTTCTCTGACTCCCGGACCATCTTCTCTATCTCCTCCTTGCTCAGCCTCCCCTTGTCGTTGGTGATGGTGATCTTGTTGT
TGTCCCTGGTCCTCGCCCTCTCGCCC