CANTATAdb - search

Detailed information on CNT30578076

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LHA8|HS704_ARATH, E-value = 5e-85

BLAST vs NONCODE:
NONVVIT003131, E-value = 2e-62

Expression of CNT30578076

Peptides detected in this lncRNA

>peptide 1 (32 aa)
NSKRLPKQTKGIIIAAKFFNTQHQRDTNNAIR*

>peptide 2 (82 aa)
MVILFFCPVVLSSADTFRIPLASMSKQTVICGEDLLLLDGHDTTSSLQTERERGNIQQEEVLDLLVALTTQDGSLDSSTISNS

>peptide 3 (39 aa)
MTPPAVSKPRERGVTSNRRRSWTFSLPSPLKMAAWTAAP*

>peptide 4 (46 aa)
MPPAMSAPAPWYILAMMGLQMPSSSFILSSNSSASASWLPSSHWMA*

Sequence

>CNT30578076
AATTCAAAAAGACTGCCCAAACAGACCAAGGGTATCATCATAGCAGCAAAGTTTTTTAACACGCAACATCAAAGAGACACTAATAATGCAATAAGATAAC
TTGAAGCGCGGATCACTAGCAAATTTCGCGCTTAGTCGACCTCCTCGATCTTGGGGCCAGCACCGCTGCCGCCAGCCGGGGGAGCATCGTCCTCGTCCAT
GCCGCCGGCCATGTCCGCGCCAGCGCCCTGGTACATCTTGGCGATGATGGGGTTGCAGATGCCCTCCAGCTCCTTCATCTTGTCATCGAACTCATCAGCC
TCGGCGAGCTGGTTGCCGTCCAGCCACTGGATGGCCTGATCGATGGCATCCTCGATCTTCTTCTTGTCCGCTGCCGGGAGCTTCGAGGCGATCTTCTCAT
CCTTGATGGTGTTGCGCATGTTGTAGGCGTAGTTCTCCAGCGCGTTCTTGGACTCCACCTTCTTCTTGTGTTCCTCATCCTCTGACTTGTACTTCTCGGC
CTCCTGGACCATCTTCTCAATCTCCTCCTTGCTGAGCCTGCCCTTGTCGTTGGTGATGGTGATCTTGTTCTTCTGCCCGGTGGTCTTGTCCTCAGCAGAC
ACGTTCAGGATACCATTGGCATCAATGTCGAAGCAAACAGTGATCTGTGGAGAAGACCTGCTCCTTCTTGACGGTCATGACACCACCAGCAGTCTCCAAA
CCGAGAGAGAGAGGGGTAACATCCAACAGGAGGAGGTCCTGGACCTTCTCGTTGCCCTCACCACTCAAGATGGCAGCCTGGACAGCAGCACCATAAGCAA
CAGC