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Detailed information on CNT30569551


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640495Actinidia chinensisNymphaea colorata20.7351.685.17209forward
CNT30535611Actinidia chinensisEucalyptus grandis21.738.7187.67219forward
CNT30172487Actinidia chinensisTrifolium pratense19.3560.5683.08195forward
CNT30440625Actinidia chinensisAegilops tauschii13.6949.1187.68138forward
CNT30665093Actinidia chinensisTriticum dicoccoides18.4559.0586.56186forward
CNT3079894Actinidia chinensisBrassica juncea20.3473.4881.95205forward
CNT30447372Actinidia chinensisSaccharum spontaneum19.3561.3286.67195forward
CNT30143339Actinidia chinensisLolium perenne16.9645.4885.38171forward
CNT301752Actinidia chinensisZea mays19.3574.7186.15195forward
CNT30479018Actinidia chinensisArabidopsis halleri18.1556.6680.87183forward
CNT30361391Actinidia chinensisSorghum bicolor19.3523.389.23195forward
CNT30369767Actinidia chinensisOryza glumipatula11.7145.9186.44118forward
CNT30116284Actinidia chinensisOryza nivara7.4427.8889.3375forward

Expression of CNT30569551

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MYLSDIYTVLVHSFIGHQTNKEIELFGEISTHFLVIVLVQEKKNEHLHLLFPFFP*

Sequence

>CNT30569551
CTGCATTCAAAAAATAAAATAAAATAAAATAAAAAGTTGAAAGAGACAAGTTTCTCAATTTAAGCTATATTTTTATTTCATCAGCGTATAAAGCATTGCC
TCTCACTCGAATGTGCACTATTCGATTGGGAAAAAAATCAAATCCAGTCACATAAATTTTCTTACTCATTACTCGTGCAAATACATGCATGTACTTGTCT
GATATCTACACAGTGCTTGTTCATAGTTTTATAGGCCATCAAACAAACAAAGAAATTGAATTATTTGGAGAAATATCTACTCATTTTCTTGTCATTGTAT
TAGTCCAAGAAAAAAAAAATGAACATCTCCATCTTCTTTTTCCTTTCTTTCCCTAAAACAAAGCTTCACAAAATTTCCTCATTTTAAGCAATCAGAGATA
AGAAACTGCTACAATACTCTTAACTAACCCGAATTTCAAATCTACTTGACATGGTTGAAATCTGAATCGAGAAATAAGAAATTGAAATTTAGCAAAAGAA
GTCCTGAGTCACACCCGTAACGGCCGTTATGTAACGGTAACGGCCATAACGGCCGGCGCCGCTCCGGTTACACCCCATTTGTAACGGAGAAAGTCGAATC
ACACCCGTAACGGCCGTTACGGAACGTTACGGCGTGTAACGGCCGTTACACTCCGGCCCGGAATAACATCTAAAGCAAACTAGTAGATCCGGTAGACCAT
ATTATGGCCACTAACAGATCCAAATAAAATTAGTGAGAGAAAGAGAGAGGAGTCTTACCGAATACAGTGTTAATGTAGTTCATGGCGACCTGATTCTTGG
CGGCGGCGCCGATCAACCGTTCGGTGTCGGTGAAGCCGACGTAGGACGGCGTCGTACGGTTGCCTTGGTCGTTGGCGATGATCTCGACGCGGTCGTGCCG
CCATACCCCGACGCACGAGTAGGTCGTGCCGAGATCGATTCCGATCGCTGGTCCCTCTCCCTTTCCGGCCATAACTTCTGAGAGAGAGGGGTACAGTAAT
CTAGGGTT