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Detailed information on CNT30115466


BLAST search results

BLAST vs Swiss-Prot:
sp|P11143|HSP70_MAIZE, E-value = 2e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697157Oryza nivaraOryza sativa25.9932.4394.4472forward
CNT30521211Oryza nivaraSetaria italica47.6548.1891.67132forward
CNT30640495Oryza nivaraNymphaea colorata32.1321.9891.0189forward
CNT30491218Oryza nivaraOlea europaea24.559.8789.7168forward
CNT30295130Oryza nivaraTriticum aestivum36.469.0688.12101reverse complement
CNT30224773Oryza nivaraHordeum vulgare32.1336.3393.2689forward
CNT30395728Oryza nivaraTriticum turgidum36.4622.5495.05101forward
CNT30568742Oryza nivaraActinidia chinensis25.6332.8791.5571forward
CNT30172487Oryza nivaraTrifolium pratense35.0230.1289.6997forward
CNT30665093Oryza nivaraTriticum dicoccoides35.7431.4393.9499forward
CNT3079894Oryza nivaraBrassica juncea35.7435.4885.8699forward
CNT30447372Oryza nivaraSaccharum spontaneum35.0230.594.8597forward
CNT30143339Oryza nivaraLolium perenne37.9127.9394.29105forward
CNT301752Oryza nivaraZea mays33.9436.0294.6894forward
CNT30685689Oryza nivaraTriticum urartu48.7452.3393.33135forward
CNT30479018Oryza nivaraArabidopsis halleri28.8824.778580forward
CNT30361391Oryza nivaraSorghum bicolor34.311.3594.7495forward
CNT30369751Oryza nivaraOryza glumipatula27.4431.1594.7476forward
CNT3024414Oryza nivaraPopulus trichocarpa31.0528.286.0586forward
CNT30578215Oryza nivaraOryza barthii28.5211.0392.4179forward
CNT30112113Oryza nivaraFicus carica20.9426.8596.5558forward

Expression of CNT30115466

Peptides detected in this lncRNA

>peptide 1 (91 aa)
ARTEDGVDGVHGDLVLGGVADEPLGVGERDIRRRGAEVDADRRALSLRHLARTGRSNSGKEKSDGNKPNLMRSRDLMRLLRDFFALRARNSF

>peptide 2 (69 aa)
HVPKTVLMGFMATWFLAASPMSRSESVNATYDGVVPRSMPIAGPSPFAISHEQEDRTVEKKNPTGTNQT*

Sequence

>CNT30115466
GCACGTACCGAAGACGGTGTTGATGGGGTTCATGGCGACCTGGTTCTTGGCGGCGTCGCCGATGAGCCGCTCGGAGTCGGTGAACGCGACATACGACGGC
GTGGTGCCGAGGTCGATGCCGATCGCCGGGCCCTCTCCCTTCGCCATCTCGCACGAACAGGAAGATCGAACAGTGGAAAAGAAAAATCCGACGGGAACAA
ACCAAACCTGATGAGATCTCGAGATCTGATGAGATTGTTGCGAGATTTCTTCGCCTTGCGAGCTCGGAATTCTTTTG