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Detailed information on CNT30218729


BLAST search results

BLAST vs Swiss-Prot:
sp|P43286|PIP21_ARATH, E-value = 2e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Kalanchoe fedtschenkoiOryza sativa28.6210.8484.3483forward
CNT30520523Kalanchoe fedtschenkoiSetaria italica34.144.1586.8799forward
CNT30730253Kalanchoe fedtschenkoiCorchorus capsularis28.9718.4685.7184forward
CNT3070602Kalanchoe fedtschenkoiQuercus suber25.5223.4986.4974forward
CNT30632234Kalanchoe fedtschenkoiVigna unguiculata23.7920.1891.369forward
CNT3094036Kalanchoe fedtschenkoiSolanum tuberosum20.346.1788.1459forward
CNT30180948Kalanchoe fedtschenkoiSecale cereale28.624.0586.7583forward
CNT30289517Kalanchoe fedtschenkoiTriticum aestivum51.0326.7681.76148forward
CNT30221191Kalanchoe fedtschenkoiHordeum vulgare15.8621.791.346forward
CNT30387764Kalanchoe fedtschenkoiTriticum turgidum51.0316.6981.76148forward
CNT30569510Kalanchoe fedtschenkoiActinidia chinensis28.9740.3885.7184forward
CNT30592144Kalanchoe fedtschenkoiMusa acuminata29.6637.3987.2186forward
CNT3084566Kalanchoe fedtschenkoiVigna radiata23.4511.5486.7668forward
CNT30436090Kalanchoe fedtschenkoiAegilops tauschii28.627.9786.7583forward
CNT30657898Kalanchoe fedtschenkoiTriticum dicoccoides51.0320.2582.43148forward
CNT30139319Kalanchoe fedtschenkoiLolium perenne21.725.3888.8963forward
CNT3013604Kalanchoe fedtschenkoiZea mays21.384.5388.7162forward
CNT30232947Kalanchoe fedtschenkoiAnanas comosus22.072787.564forward
CNT30646760Kalanchoe fedtschenkoiRosa chinensis27.5919.098580forward
CNT30129030Kalanchoe fedtschenkoiCorymbia citriodora27.9313.7385.1981forward
CNT30681057Kalanchoe fedtschenkoiTriticum urartu27.597.858580forward
CNT30355349Kalanchoe fedtschenkoiLactuca sativa28.6213.8384.3483forward
CNT30572629Kalanchoe fedtschenkoiVitis vinifera27.5930.0887.580forward
CNT30331328Kalanchoe fedtschenkoiDioscorea rotundata51.0328.8583.78148forward
CNT30176173Kalanchoe fedtschenkoiVigna angularis26.925.5788.4678forward
CNT30113851Kalanchoe fedtschenkoiFicus carica28.9730.3289.2984forward
CNT3039904Kalanchoe fedtschenkoiMarchantia polymorpha22.073.887.564forward

Expression of CNT30218729

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LRCRQCSKQGRKSCRQKPRQCRGCQPRRRRPWRPGSCSR*

>peptide 2 (46 aa)
MVRAGGPGSPWLRSRCRPRSPSSLQLGWSSESEMSWRWRSSVVLIAL

Sequence

>CNT30218729
CTGAGATGCCGGCAGTGCAGTAAACAAGGACGAAAATCATGCCGCCAAAAGCCCAGGCAATGCCGAGGATGCCAACCCCGCCGCAGGCGTCCGTGGCGGC
CTGGGAGCTGTAGCCGATGACGGTCAAGACAGTGATGTAGAGGAAGAGCATGGTGCGGGCGGGGGGTCCTGGTAGTCCTTGGCTGCGTAGTCGGTGCCGG
CCTCGTAGTCCTTCGTCATTGCAGCTAGGTTGGAGCTCGGAAAGTGAGATGAGTTGGAGATGGAGAAGTAGTGTGGTTTTGATTGCTTTG