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Detailed information on CNT30592144


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Musa acuminataOryza sativa89.1326.7685.37205forward
CNT30520523Musa acuminataSetaria italica81.747.8886.7188forward
CNT30535437Musa acuminataEucalyptus grandis28.718.4989.3966forward
CNT30730253Musa acuminataCorchorus capsularis23.0411.6590.5753forward
CNT3070602Musa acuminataQuercus suber20.4314.9291.4947forward
CNT30632234Musa acuminataVigna unguiculata25.6517.2588.1459forward
CNT30712585Musa acuminataGlycine max22.6122.2292.3152forward
CNT30159576Musa acuminataPistacia vera35.2210.2390.1281forward
CNT30180948Musa acuminataSecale cereale84.789.5186.67195forward
CNT30289867Musa acuminataTriticum aestivum86.5243.2684.42199forward
CNT30225926Musa acuminataHordeum vulgare5016.9492.17115forward
CNT30569510Musa acuminataActinidia chinensis33.4837.0298.777forward
CNT3084566Musa acuminataVigna radiata34.7813.589580forward
CNT30553402Musa acuminataOryza glaberrima26.9611.8595.1662forward
CNT30450547Musa acuminataSaccharum spontaneum24.3518.0191.0756forward
CNT30139319Musa acuminataLolium perenne50.871094.02117forward
CNT30227632Musa acuminataAnanas comosus52.6117.9588.43121forward
CNT30218729Musa acuminataKalanchoe fedtschenkoi37.3929.6687.2186forward
CNT30129030Musa acuminataCorymbia citriodora30.8712.0395.7771forward
CNT30681057Musa acuminataTriticum urartu86.5219.5383.92199forward
CNT30362596Musa acuminataSorghum bicolor89.1334.6980.98205forward
CNT30596194Musa acuminataOryza meridionalis26.9614.2595.1662forward
CNT30355349Musa acuminataLactuca sativa34.7813.3391.2580forward
CNT30370054Musa acuminataOryza glumipatula26.9611.8595.1662forward
CNT30704435Musa acuminataPrunus avium21.37.4191.8449forward
CNT30109688Musa acuminataOryza longistaminata26.9611.795.1662forward
CNT30318651Musa acuminataAsparagus officinalis35.2223.8985.1981forward
CNT30331328Musa acuminataDioscorea rotundata39.5717.7492.3191forward
CNT30148068Musa acuminataBrachypodium distachyon40.8716.2390.4394forward
CNT30576241Musa acuminataOryza barthii26.969.3595.1662forward
CNT30116009Musa acuminataOryza nivara66.9618.9287.66154forward
CNT30604398Musa acuminataOryza punctata83.048.0883.25191forward
CNT30176173Musa acuminataVigna angularis25.6519.3486.4459forward
CNT30113851Musa acuminataFicus carica77.8364.6285.47179forward
CNT3050369Musa acuminataCucumis sativus25.6513.0888.1459forward

Expression of CNT30592144

Peptides detected in this lncRNA

>peptide 1 (75 aa)
RRVDAQTGDAGGAVDEDEDHAAEGPGDAEDADAAAGRVGRVHVGVRLVLVPDHSQHGDVQEQHGGDELRDRRPVQR

>peptide 2 (59 aa)
MKIMPPKAQAMPRMPTPLQAASVGFTLGSDWCLYPITVNTVTYRNSMVAMNSAIAARYKD

Sequence

>CNT30592144
CGCCGGGTTGATGCCCAGACCGGAGATGCCGGCGGTGCAGTAGACGAGGATGAAGATCATGCCGCCGAAGGCCCAGGCGATGCCGAGGATGCCGACGCCG
CTGCAGGCCGCGTCGGTCGGGTTCACGTTGGGGTCCGACTGGTGCTTGTACCCGATCACAGTCAACACGGTGACGTACAGGAACAGCATGGTGGCGATGA
ACTCCGCGATCGCCGCCCGGTACAAAGACC