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Detailed information on CNT30657898


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XLR1|PIP26_ORYSJ, E-value = 8e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693215Triticum dicoccoidesOryza sativa37.3542.8688.64273forward
CNT30676770Triticum dicoccoidesSetaria viridis12.5943.689.1392forward
CNT30520523Triticum dicoccoidesSetaria italica38.4411.7883.99281forward
CNT30375565Triticum dicoccoidesArabidopsis thaliana8.8926.3286.1565forward
CNT30159576Triticum dicoccoidesPistacia vera23.821.9782.76174forward
CNT30221191Triticum dicoccoidesHordeum vulgare8.2128.393.3360forward
CNT30569510Triticum dicoccoidesActinidia chinensis11.2239.4295.1282forward
CNT30586754Triticum dicoccoidesMusa acuminata13.4136.393.8898forward
CNT3085023Triticum dicoccoidesVigna radiata25.7238.8481.38188forward
CNT30553402Triticum dicoccoidesOryza glaberrima37.3552.288.64273forward
CNT30436090Triticum dicoccoidesAegilops tauschii53.3537.4695.64390forward
CNT30254684Triticum dicoccoidesAvena sativa12.5940.8993.4892forward
CNT3079298Triticum dicoccoidesBrassica juncea11.920.4787.3687forward
CNT30612661Triticum dicoccoidesArabis alpina10.9427.6886.2580forward
CNT3013604Triticum dicoccoidesZea mays22.5712.0490.91165forward
CNT30228928Triticum dicoccoidesAnanas comosus21.0739.4986.36154forward
CNT30218729Triticum dicoccoidesKalanchoe fedtschenkoi20.2551.0382.43148forward
CNT30653715Triticum dicoccoidesRosa chinensis20.1125.2187.07147forward
CNT30214941Triticum dicoccoidesHelianthus annuus11.2232.1689.0282forward
CNT30681461Triticum dicoccoidesTriticum urartu57.8710099.76423forward
CNT30346584Triticum dicoccoidesEragrostis tef76.6169.7479.29560forward
CNT30596194Triticum dicoccoidesOryza meridionalis37.3562.7687.91273forward
CNT30370054Triticum dicoccoidesOryza glumipatula37.3552.288.64273forward
CNT30109688Triticum dicoccoidesOryza longistaminata37.3551.5188.64273forward
CNT30331328Triticum dicoccoidesDioscorea rotundata26.1337.2390.05191forward
CNT30101372Triticum dicoccoidesOryza rufipogon37.3536.2188.64273forward
CNT30576241Triticum dicoccoidesOryza barthii37.3541.1888.64273forward
CNT30116534Triticum dicoccoidesOryza nivara37.3563.1988.64273forward
CNT30604398Triticum dicoccoidesOryza punctata66.6220.681.31487forward
CNT30113851Triticum dicoccoidesFicus carica10.9428.889580forward

Expression of CNT30657898

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MTAAPRLLAGLMPVPVMGMVASTGTWESRALRLGSVAEKTV*

>peptide 2 (82 aa)
ERERERKKLNYVVVPCGLLVVDDGGAEAPGGVDAGAGDGDGGEHGDVGVAGAALGVGGGEDGVDEHEGADDLRPEGCAAGEP*

>peptide 3 (64 aa)
MLAPPPLAWYASLMMPLTMPAPTMPPAHCATMYITARSSDTLRASSSPNVTAGLMWPPEMPAVQ*

Sequence

>CNT30657898
GAGAGAGAGAGAGAGAGAGGAAGAAGCTTAATTACGTGGTTGTCCCATGCGGCCTTCTTGTTGTAGATGACGGCGGCGCCGAGGCTCCTGGCGGGGTTGA
TGCCGGTGCCGGTGATGGGGATGGTGGCGAGCACGGGGACGTGGGAGTCGCGGGCGCTGCGCTTGGGGTCGGTGGCGGAGAAGACGGTGTAGACGAGCAC
GAAGGTGCCGACGATCTCCGCCCCGAGGGCTGTGCCGCGGGAGAACCCTGAGGCGACCATGTTGGCGCCGCCGCCGTTGGCCTGGTACGCGTCCCTCATG
ATGCCCTTGACGATGCCGGCGCCCACGATGCCGCCCGCGCACTGCGCCACGATGTACATCACGGCGCGCAGCAGCGACACCTTGCGCGCCAGCAGCAGCC
CGAACGTCACCGCGGGGTTGATGTGGCCCCCCGAGATGCCGGCGGTGCAGTAGACGAGGACGAAGATCATGCCGCCGAAGGCCCAGGCGATGCCGAGCAC
GCCGACGCCGCCGCACGGGTCGGCCGCGGACTGCACCTTGTAGCCGATGACGGTGGCGACGGTGATGTAGAGGAAGAGCAGCGTGGCGACGAACTCGGCG
ATGAGCGCCCGGTAGAAGGACCACATCCGGAGCTCCCCCATCTCGAAGAGCGGCGCCGGCGGCGGGTCGGAGTAGTCCTTGTGCGCCGGCGCGGCGTGCT
CCGGCTCCTCGCTCACCTCCTTGGCCATGGC