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Detailed information on CNT30632234


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ATM4|PIP27_MAIZE, E-value = 4e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730253Vigna unguiculataCorchorus capsularis20.7615.691.5571forward
CNT30636643Vigna unguiculataCapsicum annuum24.8518.0184.7185forward
CNT3094036Vigna unguiculataSolanum tuberosum23.688.4786.4281forward
CNT30569510Vigna unguiculataActinidia chinensis15.525.4888.6853forward
CNT30592144Vigna unguiculataMusa acuminata17.2525.6588.1459forward
CNT3084810Vigna unguiculataVigna radiata67.8469.0581.03232forward
CNT30218729Vigna unguiculataKalanchoe fedtschenkoi20.1823.7991.369forward
CNT30355349Vigna unguiculataLactuca sativa32.1618.3384.55110forward
CNT30116611Vigna unguiculataOryza nivara11.9920.392.6841forward
CNT30113851Vigna unguiculataFicus carica17.2521.388.1459forward

Expression of CNT30632234

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MIVFCRVFSLLLNLNIFRHYFSTLNHYYT*

>peptide 2 (31 aa)
MKIMPPKAQAMPRMPTPSHSVPPTLASVCLL*

Sequence

>CNT30632234
CCTGAAATACTGGCAGTGCAGTAAACAAGGATGAAAATCATGCCACCAAAGGCCCAAGCGATGCCGAGAATGCCAACCCCATCACATTCGGTGCCACCAA
CGTTGGCGTCGGTCTGTCTTTTGTAGCCAATTATGGTTAGCACAGTGACATAGAGGAAGAGAAGGGTTGCTATGAACTCAGCGATAAGGGCTCTGTAGAA
GGACCACTGTGTGAGCTCTTCGGGGTCGAACAAGGGTGCCGGAGGAGGGTCATGATAGTCTTTTGCAGAGTATTCTCCTTGCTCTTGAACCTCAACATCT
TTCGCCATTATTTCTCAACCCTCAATCACTACTATACTTAGG