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Detailed information on CNT30681057


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XUA6|PIP23_ORYSJ, E-value = 3e-123

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Triticum urartuOryza sativa54.4772.4587.21555forward
CNT30671184Triticum urartuSetaria viridis21.6939.3288.69221forward
CNT30520523Triticum urartuSetaria italica44.4618.9984.33453forward
CNT30535437Triticum urartuEucalyptus grandis14.4341.1883.67147forward
CNT30375565Triticum urartuArabidopsis thaliana8.4434.8284.8886forward
CNT30615812Triticum urartuSesamum indicum5.325.3588.8954forward
CNT30180948Triticum urartuSecale cereale40.9220.3487.77417forward
CNT30289867Triticum urartuTriticum aestivum35.8279.3594.52365forward
CNT30221219Triticum urartuHordeum vulgare13.7421.0298.57140forward
CNT30387873Triticum urartuTriticum turgidum27.0954.3395.65276forward
CNT30569510Triticum urartuActinidia chinensis5.9929.3395.0861forward
CNT30592144Triticum urartuMusa acuminata19.5386.5283.92199forward
CNT3084566Triticum urartuVigna radiata12.6621.985.27129forward
CNT30552571Triticum urartuOryza glaberrima21.285.3891.67216forward
CNT30437070Triticum urartuAegilops tauschii32.486796.37331forward
CNT30254684Triticum urartuAvena sativa20.2291.5689.32206forward
CNT30612661Triticum urartuArabis alpina9.0331.8386.9692forward
CNT30450547Triticum urartuSaccharum spontaneum9.7231.8385.8699forward
CNT30139319Triticum urartuLolium perenne25.2221.9789.88257forward
CNT3012516Triticum urartuZea mays20.0214.790.69204forward
CNT30227632Triticum urartuAnanas comosus16.0924.3385.98164forward
CNT30218729Triticum urartuKalanchoe fedtschenkoi7.8527.598580forward
CNT30202937Triticum urartuHelianthus annuus13.1532.5281.34134forward
CNT30346584Triticum urartuEragrostis tef55.8470.8685.41569forward
CNT30362596Triticum urartuSorghum bicolor24.0441.4684.08245forward
CNT30355344Triticum urartuLactuca sativa7.4625.4284.2176forward
CNT30318651Triticum urartuAsparagus officinalis15.0145.1381.7153forward
CNT30120547Triticum urartuCitrus clementina6.3825.5989.2365forward
CNT30148622Triticum urartuBrachypodium distachyon21.388.9387.56217forward
CNT30102464Triticum urartuOryza rufipogon37.7815.1586.23385forward
CNT30116009Triticum urartuOryza nivara2126.2989.72214forward
CNT30604398Triticum urartuOryza punctata57.3124.786.3584forward
CNT30113851Triticum urartuFicus carica8.3430.6991.7685forward

Expression of CNT30681057

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MPPNAQAMPRIPTPLQAASAALGPAGSAWCLYPMTVATVM*

Sequence

>CNT30681057
TGAATCACTGGTACGCATGCTGAGAGGAGGGTGATAACTTACTGGGACGTGGGAGTCACGGGCGCTGCGCTTGGGGTCGGTGGCGGAGAAGACGGTGTAG
ACGAGAACGAAGGTGCCGATGATTTCGGCGGCGAGGCCGGTGCCCTTGGAGAAGCCGGAGCTGAGCTCGTTGGCGCCGCCGCCGTAGCGCACGTAGAAGG
CGCTCTGGAACCCCTTGACGAGCCCGACGCCGCAGATTGCGCCGAGGCACTGCGCGATGATGTAGAGCAGCGCGCGCACCAGCGACACCTTGCGCGCCAG
GAACAGCCCGAAGGTCACCGCCGGGTTTATGTGGCCACCCGACACACCGGCGGTGCAGTAGACGAGCACGAAGATCATGCCGCCGAACGCCCAGGCGATG
CCGAGGATTCCCACGCCGCTGCAGGCCGCGTCGGCGGCGTTGGGGCCGGCGGGGTCCGCCTGGTGCTTGTACCCGATGACGGTGGCCACGGTGATGTAGA
GGAAGAGGAGCGTGGCCACGAACTCGGCGATCACCGCGCGGTACAGGGACCACTTGGTCAGCTCCTCGGCGTCGAAGAGCGGCGCCGGCGGCGGGTCGGA
GTAGTCCTTGGCCGCGTACTCCCCACCGGGTGGCGCCGCCTCGATGTCCTTGGCCATCGTCGCGCTCCTCAGCCGATCGACAAGCTAGGGTGGGTGTGTG
TGGTGGTGCCCAAGGTGCGAGTGCGCCGAAGCTCTGTGTGGTGGTCATTGGGGCCGGCGGGGTCCGCCTGGTGCTTGTACCCGATGACGGTGGCCACGGT
GATGTAGAGGAACAGCAGCGTGGCCACGAACTCGGCGATGACCGCGCGGTACAGGGACCACTTGGTCAGCTCCTCGGCATCGAAGAGCGGCGCCGGCGGT
GGGTCGGAGTAGTCCTTGGCCCCGTACTCCCCGCCGGGGGGCGCCGCCTCGATGTCCTTGGCCATCCTCTCTGCCTCGACTGATCGACAAGCTAGGGTGA
GTGTCTCTGCTCAAGATGC