« Back to Actinidia chinensis search


Detailed information on CNT30569510


BLAST search results

BLAST vs Swiss-Prot:
sp|P93004|PIP27_ARATH, E-value = 2e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Actinidia chinensisOryza sativa29.818.0996.7762forward
CNT30520523Actinidia chinensisSetaria italica39.423.4493.982forward
CNT30730253Actinidia chinensisCorchorus capsularis2511.4390.3852forward
CNT3070602Actinidia chinensisQuercus suber22.614.9291.4947forward
CNT30632234Actinidia chinensisVigna unguiculata25.4815.588.6853forward
CNT30712585Actinidia chinensisGlycine max21.6319.2391.1145forward
CNT30180948Actinidia chinensisSecale cereale39.42493.982forward
CNT30289517Actinidia chinensisTriticum aestivum39.4214.8395.1282forward
CNT30225926Actinidia chinensisHordeum vulgare29.338.9891.861forward
CNT30387764Actinidia chinensisTriticum turgidum39.429.2495.1282forward
CNT30592144Actinidia chinensisMusa acuminata37.0233.4898.777forward
CNT3084566Actinidia chinensisVigna radiata39.4213.9293.982forward
CNT30553402Actinidia chinensisOryza glaberrima31.7312.6292.4266forward
CNT30436090Actinidia chinensisAegilops tauschii39.427.8895.1282forward
CNT30657898Actinidia chinensisTriticum dicoccoides39.4211.2295.1282forward
CNT30450547Actinidia chinensisSaccharum spontaneum26.9218.0191.0756forward
CNT30139319Actinidia chinensisLolium perenne29.335.2196.7261forward
CNT30218729Actinidia chinensisKalanchoe fedtschenkoi40.3828.9785.7184forward
CNT30646760Actinidia chinensisRosa chinensis21.1510.593.1844forward
CNT30129030Actinidia chinensisCorymbia citriodora38.9413.7393.8381forward
CNT30681057Actinidia chinensisTriticum urartu29.335.9995.0861forward
CNT30596194Actinidia chinensisOryza meridionalis31.7315.1792.4266forward
CNT30355349Actinidia chinensisLactuca sativa39.4213.6789.0282forward
CNT30370054Actinidia chinensisOryza glumipatula31.7312.6292.4266forward
CNT30704435Actinidia chinensisPrunus avium25.488.0288.6853forward
CNT30109688Actinidia chinensisOryza longistaminata31.7312.4592.4266forward
CNT30331328Actinidia chinensisDioscorea rotundata40.3816.3792.8684forward
CNT30148068Actinidia chinensisBrachypodium distachyon30.7711.0593.7564forward
CNT30576241Actinidia chinensisOryza barthii31.739.9592.4266forward
CNT30116611Actinidia chinensisOryza nivara36.0637.1393.3375forward
CNT30604398Actinidia chinensisOryza punctata39.423.4790.2482forward
CNT30113851Actinidia chinensisFicus carica39.4229.693.982forward

Expression of CNT30569510

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MKIMPPKAQAMPRRPTPSQGPDCFLVAMNSAIRAL*

>peptide 2 (68 aa)
DAGGAVDEDEDHAAEGPGDAEEADAVAGAGLFLGGDELRDQGSVEGPRLQLRHVKQRRRWRVHVVLPAL

Sequence

>CNT30569510
AGATGCCGGCGGTGCAGTAGACGAGGATGAAGATCATGCCGCCGAAGGCCCAGGCGATGCCGAGGAGGCCGACGCCGTCGCAGGGGCCGGACTGTTTCTT
GGTGGCGATGAACTCCGCGATCAGGGCTCTGTAGAAGGACCACGTCTTCAGCTCCGCCATGTCAAACAGCGGCGCCGGTGGCGGGTCCACGTAGTCCTTC
CGGCCTTG