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Detailed information on CNT30221191


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6K215|PIP22_ORYSJ, E-value = 7e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671777Hordeum vulgareSetaria viridis47.6438.1187.13101forward
CNT30520523Hordeum vulgareSetaria italica44.813.9888.4295forward
CNT30159576Hordeum vulgarePistacia vera27.367.3287.9358forward
CNT3084566Hordeum vulgareVigna radiata24.538.8396.1552forward
CNT30657898Hordeum vulgareTriticum dicoccoides28.38.2193.3360forward
CNT3012516Hordeum vulgareZea mays44.816.8488.4295forward
CNT30227873Hordeum vulgareAnanas comosus46.2315.9386.7398forward
CNT30218729Hordeum vulgareKalanchoe fedtschenkoi21.715.8691.346forward
CNT30346584Hordeum vulgareEragrostis tef46.2312.289.898forward
CNT30355344Hordeum vulgareLactuca sativa25.9418.3989.0955forward
CNT30704435Hordeum vulgarePrunus avium23.117.4189.849forward
CNT30120547Hordeum vulgareCitrus clementina24.0620.0888.2451forward
CNT30331328Hordeum vulgareDioscorea rotundata23.589.759050forward
CNT30102464Hordeum vulgareOryza rufipogon50.944.2587.96108forward
CNT30576241Hordeum vulgareOryza barthii27.838.993.2259forward
CNT30604398Hordeum vulgareOryza punctata50.944.5787.96108forward

Expression of CNT30221191

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MPPNAQAMPRMPTPLHAASAALGPAGSAWCL

>peptide 2 (69 aa)
EPHATDGAQALRDDVEHRAHQRNLARQEQPERHRRDEDHAAERPGDAEDADAAARRVGSIGAGGVRLVLV

Sequence

>CNT30221191
ACGAGCCCCACGCCACAGATGGCGCCCAGGCACTGCGCGATGATGTAGAGCACCGCGCGCACCAGCGAAACCTTGCGCGCCAGGAACAGCCCGAACGTCA
CCGCCGGGACGAAGATCATGCCGCCGAACGCCCAGGCGATGCCGAGGATGCCGACGCCGCTGCACGCCGCGTCGGCAGCATTGGGGCCGGCGGGGTCCGC
CTGGTGCTTGTA