CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30520226 | Setaria italica | II:44128126-44128437 (-) | coding (0.406) | - | 88 | 4.77 | 2 | Conserved counterparts: CNT30694913 | |
CNT30520225 | Setaria italica | II:1735008-1736313 (-) | coding (0.18) | - | 97 | 13.31 | 2 | Expressed preferentially in leaf | |
CNT30520224 | Setaria italica | II:29937044-29938077 (+) | coding (0.28) | 0.000000000000001 (sp|Q6ES51|TIF6B_ORYSJ) | 57 | 0.25 | 2 | ||
CNT30520223 | Setaria italica | II:43195885-43197183 (+) | coding (0.285) | 4e-43 (sp|Q9S7W1|CB4C_ARATH) | 58 | 0.85 | 3 | Conserved counterparts: CNT30229721, CNT30452520, CNT30577064, CNT30596509, CNT30604335, CNT30102749, CNT3013737, CNT30694831, CNT30708157 Expressed preferentially in root |
|
CNT30520221 | Setaria italica | II:47815856-47817312 (+) | noncoding (-0.0684032) | 2e-16 (sp|Q9SW70|SRP_VITRI) | 85 | 7.86 | 2 | Conserved counterparts: CNT30132065 Expressed preferentially in root |
|
CNT30520220 | Setaria italica | II:31247678-31248622 (+) | coding (0.234) | - | 59 | 10.86 | 1 | Expressed preferentially in stem | |
CNT30520218 | Setaria italica | II:3852399-3853330 (+) | noncoding (-0.026624) | 7e-23 (sp|Q940H8|FRL4B_ARATH) | 79 | 5.34 | 2 | Conserved counterparts: CNT30143000, CNT30451421, CNT30576925, CNT30102775, CNT3013388, CNT30694852 Expressed preferentially in root |
|
CNT30520217 | Setaria italica | II:38484293-38484899 (+) | noncoding (-0.065536) | - | 72 | 6.09 | 2 | Conserved counterparts: CNT30103285 | |
CNT30520214 | Setaria italica | II:19109651-19111764 (-) | coding (0.181) | - | 90 | 9.53 | 2 | Expressed preferentially in leaf | |
CNT30520211 | Setaria italica | II:7732504-7735097 (-) | coding (0.153) | - | 92 | 7.53 | 2 | Expressed preferentially in leaf | |
CNT30520210 | Setaria italica | II:47417759-47418337 (+) | noncoding (-0.0004096) | - | 61 | 99.51 | 2 | Expressed preferentially in stem | |
CNT30520209 | Setaria italica | II:24914315-24914806 (-) | noncoding (-0.0004096) | - | 49 | 10.05 | 2 | ||
CNT30520206 | Setaria italica | II:347762-348655 (-) | noncoding (-0.008192) | - | 61 | 15.8 | 2 | ||
CNT30520205 | Setaria italica | II:33140237-33141154 (+) | coding (0.281) | 2e-26 (sp|Q9SX78|CXE2_ARATH) | 75 | 19.15 | 2 | ||
CNT30520204 | Setaria italica | II:3763510-3764338 (+) | noncoding (-0.0004096) | - | 61 | 8.18 | 2 | Expressed preferentially in leaf | |
CNT30520202 | Setaria italica | II:1903427-1907661 (+) | noncoding (-0.191283) | - | 84 | 2.51 | 2 | ||
CNT30520201 | Setaria italica | II:43195765-43197112 (+) | coding (0.194) | 1e-43 (sp|Q9S7W1|CB4C_ARATH) | 50 | 1.07 | 3 | Conserved counterparts: CNT30229721, CNT30452520, CNT30577064, CNT30596509, CNT30604335, CNT30102749, CNT3013737, CNT30694831, CNT30708157 Expressed preferentially in root |
|
CNT30520200 | Setaria italica | II:47368618-47369750 (-) | noncoding (-0.0372736) | - | 75 | 4.47 | 2 | Expressed preferentially in stem | |
CNT30520196 | Setaria italica | II:41687267-41696161 (+) | coding (0.309) | 7e-107 (sp|P0C1M0|ATPG_MAIZE) | 41 | 1073 | 4 | Conserved counterparts: CNT30229753, CNT30453464, CNT30577158, CNT30694821 Expressed preferentially in root |
|
CNT30520195 | Setaria italica | II:7323386-7323706 (-) | coding (0.436) | - | 87 | 0 | 2 | ||
CNT30520193 | Setaria italica | II:16920483-16922347 (-) | noncoding (-0.0569344) | - | 98 | 15.3 | 3 | ||
CNT30520192 | Setaria italica | II:41604782-41606010 (+) | coding (0.083) | - | 83 | 2 | 2 | Expressed preferentially in leaf | |
CNT30520188 | Setaria italica | II:35962358-35963387 (+) | noncoding (-0.0524288) | - | 59 | 3.04 | 2 | ||
CNT30520187 | Setaria italica | II:45251618-45252346 (-) | noncoding (-0.024576) | - | 69 | 32.99 | 2 | ||
CNT30520186 | Setaria italica | II:15121624-15121972 (-) | noncoding (-0.144998) | - | 92 | 0 | 2 | ||
CNT30520185 | Setaria italica | II:48797265-48797686 (-) | noncoding (-0.0258048) | - | 39 | 14.03 | 2 | Expressed preferentially in stem | |
CNT30520184 | Setaria italica | II:35152113-35152936 (-) | coding (0.163) | 4e-39 (sp|Q00327|PSAG_HORVU) | 66 | 0.1 | 3 | Conserved counterparts: CNT30449622, CNT30577680, CNT30103477, CNT3013389 Expressed preferentially in root |
|
CNT30520183 | Setaria italica | II:43720397-43720735 (-) | noncoding (-0.0892928) | - | - | 758.55 | 1 | ||
CNT30520182 | Setaria italica | II:31132714-31133157 (+) | coding (0.51) | - | 60 | 6.11 | 1 | Expressed preferentially in leaf | |
CNT30520178 | Setaria italica | I:18892251-18895241 (-) | noncoding (-0.038912) | - | 56 | 14.4 | 3 | ||
CNT30520175 | Setaria italica | I:22095445-22096795 (-) | coding (0.329) | - | 52 | 59.57 | 2 | Conserved counterparts: CNT30575136, CNT30603768 Expressed preferentially in leaf |
|
CNT30520174 | Setaria italica | I:32258270-32273336 (-) | coding (0.347) | 5e-88 (sp|Q9FN42|CLPP2_ARATH) | 61 | 148.26 | 3 | Conserved counterparts: CNT30100439, CNT309286 Expressed preferentially in root |
|
CNT30520173 | Setaria italica | I:32351549-32351869 (-) | noncoding (-0.049152) | - | 64 | 0 | 1 | ||
CNT30520171 | Setaria italica | I:30241017-30242121 (+) | noncoding (-0.04096) | - | 57 | 5.99 | 1 | ||
CNT30520169 | Setaria italica | I:3605896-3606258 (+) | noncoding (-0.0004096) | - | 55 | 81.32 | 1 | ||
CNT30520168 | Setaria italica | I:11056681-11057175 (+) | noncoding (-0.0118784) | - | 51 | 0.64 | 2 | ||
CNT30520167 | Setaria italica | I:38797571-38799529 (+) | coding (0.196) | - | 72 | 12 | 2 | Expressed preferentially in root | |
CNT30520166 | Setaria italica | I:8188265-8190708 (-) | noncoding (-0.0458752) | - | 53 | 21.41 | 3 | ||
CNT30520165 | Setaria italica | I:12716196-12717325 (+) | noncoding (-0.0004096) | - | 42 | 190.47 | 3 | ||
CNT30520161 | Setaria italica | I:26086277-26089589 (-) | noncoding (-0.0659456) | - | 55 | 3.53 | 1 | ||
CNT30520160 | Setaria italica | I:37907211-37908074 (-) | coding (0.211) | 1e-106 (sp|Q6Z2T6|CHLP_ORYSJ) | 54 | 0.4 | 2 | Conserved counterparts: CNT30575301, CNT30595779, CNT30690978 Expressed preferentially in root |
|
CNT30520156 | Setaria italica | I:32967055-32970392 (+) | coding (0.141) | - | 50 | 11.47 | 3 | ||
CNT30520154 | Setaria italica | I:41370943-41371400 (-) | noncoding (-0.0212992) | - | 79 | 5.06 | 2 | ||
CNT30520146 | Setaria italica | I:2537479-2537891 (-) | coding (0.267) | 5e-25 (sp|Q9SS17|RS241_ARATH) | 87 | 1.49 | 2 | ||
CNT30520145 | Setaria italica | I:1286010-1298116 (+) | coding (0.383) | - | 58 | 0.47 | 3 | Expressed preferentially in leaf | |
CNT30520144 | Setaria italica | I:38221853-38222900 (-) | coding (0.279) | - | 80 | 1.15 | 2 | Conserved counterparts: CNT30595678, CNT308797 Expressed preferentially in root |
|
CNT30520143 | Setaria italica | I:29580840-29581328 (+) | noncoding (-0.120832) | - | 90 | 0.25 | 2 | ||
CNT30520141 | Setaria italica | I:8386582-8387728 (+) | coding (0.217) | - | 92 | 11.11 | 1 | Expressed preferentially in leaf | |
CNT30520135 | Setaria italica | I:7930801-7931710 (-) | noncoding (-0.0606208) | - | 67 | 9.38 | 1 | ||
CNT30520129 | Setaria italica | I:29580750-29581348 (+) | noncoding (-0.13353) | - | 82 | 0.2 | 2 |