« Back to Oryza barthii search


Detailed information on CNT30575136


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10716|CYSP1_MAIZE, E-value = 2e-54

BLAST vs NONCODE: nothing found

Expression of CNT30575136

Peptides detected in this lncRNA

>peptide 1 (36 aa)
AIPPSVGVILLTLKATGFQKIAEGISHQSTIASSIT*

>peptide 2 (69 aa)
MMTHPKEKRKFYYFFLNRYNDIKGTVVIQLYNNITKMGSHLGPSYQNERVHQASAHKRLAVYPSGETVK*

>peptide 3 (31 aa)
MHKVTMNSQRDAYLDLILVLSTCGRPRETPT*

>peptide 4 (33 aa)
MQLLSQISLSHSFAPISLSPSHLGALPNHKPRK*

Sequence

>CNT30575136
GCCATCCCTCCCAGTGTAGGGGTAATCCTTCTCACTCTCAAGGCCACCGGATTTCAAAAGATAGCTGAAGGCATTAGTCATCAATCCACCATTGCATCCA
GCATCACATGAATCAGGTTCTGATGAATCACACTGCAAAATTAGATAACAATGAAGCCCAGTAAGTTGAGATACCCCATTCAGTTGAAACAGGTAACAGT
AGAAAACAAATAACAACAGTACATATCCCACTGTCAAGTCAAAAAAAGTATTATAATACCAGGAAGGCTAAAAATTATTTGAGCACGACTCGGGTAAGCT
TTACATGTGTACTTTGCGATGAAAGCAATGTGAAAATCACTTAAGCTGGTTACGACAAATTGTAGAGGTTGTGCAAGACATTAGCCTGGTGCTACTTTGT
AAAATTACCATAGGAATCACTGTTGATTATCTTTTAAATATATGAGAAAATTGTTTTTTCTGAACAAATATTTCTCGCATTTCCTAATGTAGAAGCTTAG
TAATGAAAAGCCTTCTAGAATGAGAGCCACTTACATCTTACTACCAAAAAATCCTACATAGAATTTTCAACTAGGAAGAGAATCACCCATGCTATAGGCG
GAAATTAAAACGGTGGTGCAGACTTTGTAAGGATGGTTTAGTGAATTGTGTTATTATGGAAATAAGATTTGTTTTATTTTTGAACAGAACAGAGAAGCAC
TAACTTTTTCATTAATTAGGATTTAGGAGTGAAGCTTCAAGAAGTAAATATGGAAAGAAATAGGTCAAGAGCAAGCCCCTAAAATATGATGGACACAACC
AAATAAAGAGGAAACCGGAAATTTGCCCCTAAAATATGATGACACATCCAAAAGAAAAGAGGAAATTTTATTATTTTTTTCTTAATCGATATAATGATAT
AAAAGGTACAGTAGTTATTCAGTTGTACAACAATATCACCAAGATGGGGTCTCACCTGGGGCCCAGTTACCAAAACGAAAGAGTACATCAAGCCAGTGCA
CACAAACGTTTGGCTGTCTATCCATCAGGTGAGACAGTAAAATAAGAAATGAAGCAATGACAGAAACAACCTGCGGCCGATATCGACTCCATTTATATTT
TTCACTCAAGTGAACTTAATGGTTGAGATTTGAGTAATTTACAACTTCCTCATGGTAGCTTCACTAGTACCTAAAAACTAAAATTGCTGGAATACATGAC
AACCCCAGAACATCGGGTACTTTCTTAACTCCCTTTCTCTAAAATTTAACTAATCATAGGGTTCCCAAGTTCAGCACTTTTTAGTTCATTAAGTGCCCAC
TCAAACAACCCTTTGTGCCCAATTGTATACGCTTGTTCGTTACCATACCATAGGCACGTACCAACACACAAGGGTGCATGAACTCTCTTATTTCATAGAC
CTATCAATGCACAAGGTCACCATGAACTCCCAGAGAGACGCTTACCTAGATCTCATCTTAGTTTTATCCACCTGCGGTAGACCCAGAGAGACGCCTACCT
AGACCGATCTTCCAGAGCGACATGTGCCAGTATCAATTGGAGATTTTATCCACTCAGCCTTGCATTCATCATCTTTTGTTTTATTCACCTACTTCACCAC
TATAAAATCGACCACGACAAATTTGCTTGCTAAGTTCACCACTTTGGTTTGACTTCTTAAGCACTGATAATACCACAAGCCACTCTTTTTTCCTCATAAT
TTCCCTTTCAAAGTTAGCCAAGGAATCATGCAACTCCTTTCCCAAATTTCCCTTTCCCATTCATTTGCCCCAATTTCCCTTTCCCCTTCTCATTTGGGTG
CGCTGCCCAATCACAAACCAAGAAAATAGATAGGAAAAGGACAGCGCAGCAGCTGACAAAACATTGGCGGAAAGCCAGAAAAATCCAACCTCTCTTATAG
CACCCATCCAACCTCTCTTATAGCACCCATAGAAGCACAGACCAATCACAAAATTACAAATAAAACTTGCTCCTAATAAAAGGATAATAATATACCAGTA
CGCAAGAACAAGAAAGGGGAAGCAAACGCCTCTCACCTCATGGTCGCAATCGACCATCTGCTGCTCGGAGAGCACGTCCATCTTGCCCGTCGCCAGGTAG
TTCGCTCCCTCTAGCGCCCCCGACGCGCTGAACGACCAGCACGACCCGCACGATCCCTGCAAAAGCAAAAAAATTAAAAAAAAATCAAGAAACGATAAGA
CGGCTGATTCAATCGAGAAATCAAAGGAGGAGTCCTTGGTTTGGGGGAAAAATCGACGGGAGACGAGAGGGGAACCTGGTTCTTGACGGGGCCGACGGCG
CCGTGGTCTCTCCAGTCGAAGTCGTCGGGGAGGCCGAGGTAGGCCCGGCGGAACTCGGCCGGGGTGAGGTCGGAGAACTTGGTGACGCCGTGCTCCGCGG
AGGGGTCGAGCAGCTGGTGGCGGCGCGCGCGGCGGAGGTTGGCCTTGAACACGGAGAGCCGGTACGCGTGCTCGTCGGCGTCACGGTAGGACTTCCCGAA
CCTCTGGACGAAGCTGGCGAAGTGGCGCTCCGCGTTCAGCTCCAGCTCGTTGTCGTCGCCGCCGCCGACCACCTGCCGGATCAGCGGCTCCTCCTCGCCG
GGGACTGAGGCGGCGGCCACCGCCGGGGAGAGGAGGAGGAGGCCGAGGAGGAGGAGGCGGTGATCCATGGTGGGGGGATTTGGTGCCTGCTTGTTTGGAA
TTGGATTGGTTGCTTCTCCGCGGTAGGGGGGCGTAGTGGTAGCTTTATAGGGAGTTGTTAAGAGCAGATTTTTTTTT