« Back to Phaseolus vulgaris search


Detailed information on CNT30524807


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 4e-142

BLAST vs NONCODE:
NONPOPT000585, E-value = 2e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641080Phaseolus vulgarisNymphaea colorata31.4130.9583.03277forward
CNT30549537Phaseolus vulgarisIpomoea triloba44.158.4184.32389forward
CNT30698521Phaseolus vulgarisQuercus lobata19.6130.8485.55173forward
CNT30266729Phaseolus vulgarisChenopodium quinoa40.0227.3979.89353forward
CNT30158121Phaseolus vulgarisPistacia vera17.9125.2889.24158forward
CNT30190465Phaseolus vulgarisSecale cereale2267.3684.02194forward
CNT30561874Phaseolus vulgarisActinidia chinensis31.6331.6382.44279forward
CNT30662024Phaseolus vulgarisTriticum dicoccoides12.4721.6585.45110forward
CNT3013982Phaseolus vulgarisZea mays20.9863.7984.32185forward
CNT30608385Phaseolus vulgarisGossypium raimondii31.9751.2784.4282forward
CNT30218287Phaseolus vulgarisKalanchoe fedtschenkoi40.9369.5679.22361forward
CNT3066706Phaseolus vulgarisLeersia perrieri15.0839.1284.96133forward
CNT30650282Phaseolus vulgarisRosa chinensis43.4232.5183.81383forward
CNT30624603Phaseolus vulgarisDaucus carota32.9944.0984.54291forward
CNT30477100Phaseolus vulgarisArabidopsis halleri14.8533.1684.73131forward
CNT30367696Phaseolus vulgarisSorghum bicolor41.542.5680.6366forward
CNT30620812Phaseolus vulgarisCajanus cajan36.5125.9384.47322forward
CNT30597069Phaseolus vulgarisOryza meridionalis28.4612.5487.65251forward
CNT30358838Phaseolus vulgarisLactuca sativa21.8828.2281.35193forward
CNT30571189Phaseolus vulgarisVitis vinifera22.3431.9888.83197forward
CNT3055182Phaseolus vulgarisAmborella trichopoda24.4920.4482.87216forward
CNT3022568Phaseolus vulgarisPopulus trichocarpa41.3826.4184.66365forward
CNT30331991Phaseolus vulgarisDioscorea rotundata12.4723.2686.36110forward
CNT30148817Phaseolus vulgarisBrachypodium distachyon26.9820.5981.93238forward
CNT30101941Phaseolus vulgarisOryza rufipogon41.3843.7180365forward
CNT30113329Phaseolus vulgarisFicus carica22.918.7684.65202forward

Expression of CNT30524807

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKHANYSSTPGKTSIKEGIKSTTRLGMRFL*

>peptide 2 (67 aa)
MMIFLPVRPASPWGPPITNRPDGLRWKMVFSSRYFSGMTGLITCSLRSAAIWSLLTVSSCWVEIRTV*

>peptide 3 (73 aa)
MSTPATVGINDDLSSSETSITMGATNHEPTRWVKVEDGLLIKVLLGNDWLDNMLFKVSSNLVIAHSLIMLGGN*

Sequence

>CNT30524807
GAGAGTAATACTGCATTAACATAAAAATAAATGGTAAGTAAAAATAAACAGTTTAGGTATGATGATAAGGAAATGGCATTAGACCTAGGATCGTAGCAGT
AATGAAACACGCAAATTATTCATCAACACCTGGCAAGACATCCATTAAAGAAGGGATTAAGTCCACAACACGTCTAGGCATGAGGTTTCTCTGACTTGAG
TGGCTTCACCACTTCCCATGTGAAGTCAGGGTCATCCCTTCCGAAGTGTCCATAAGCAGCTGTCTTCAGGAACCTGTGGCCACCCCTCTTGAGGTCCAAG
TTAATGGTGATCATTCCAGGTCTGAAGTCGAAATTCTCCTTCACAATCTGAAGAATCTCCTTATCAGGAATCTTTCCGGTTCCATAGGTGTCAACAAAGA
CTGACAAGGGCTCAGGGACACCGATGGCATAAGAAACTTGGACAATGCACCTTCTGGCAAACCCATTTGCCACAACGCTCTTTGCAGCCTGCCTCACAAT
ATAGGCACCACTTCTGTCAACCTTGGTTGGGTCCTTGCCTGAAAAGGCACCACCACCATGAGCACCACTTCTGTCAACCTTGGTTGGGTCCTTGCCTGAA
AAGGCACCACCACCATGAGCACCCCAGCCACCGTAGGTATCAATGATGATCTTTCTTCCAGTGAGACCAGCATCACCATGGGGGCCACCAATCACGAACC
GACCCGATGGGTTAAGGTGGAAGATGGTCTTCTCATCAAGGTACTTCTCGGGAATGACTGGCTTGATAACATGCTCTTTAAGGTCAGCAGCAATTTGGTC
ATTGCTCACAGTCTCATCATGTTGGGTGGAAATTAGAACAGTGTGAACACGGATTGGAACCATGGCACCGTTGTCATTGTTG