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Detailed information on CNT30266729


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 3e-80

BLAST vs NONCODE:
NONATHT001922, E-value = 1e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672380Chenopodium quinoaSetaria viridis34.656.1783.63446forward
CNT30521184Chenopodium quinoaSetaria italica34.619.483.41446forward
CNT30549537Chenopodium quinoaIpomoea triloba35.4568.6281.4457forward
CNT30698521Chenopodium quinoaQuercus lobata18.5442.682.85239forward
CNT30618114Chenopodium quinoaSesamum indicum17.6150.2282.82227forward
CNT30729048Chenopodium quinoaCorchorus capsularis20.4840.2484.47264forward
CNT30524807Chenopodium quinoaPhaseolus vulgaris27.3940.0279.89353forward
CNT30628391Chenopodium quinoaVigna unguiculata34.1338.3679.77440forward
CNT30490001Chenopodium quinoaOlea europaea9.2323.9984.03119forward
CNT30189384Chenopodium quinoaSecale cereale32.8953.9482.31424forward
CNT30294498Chenopodium quinoaTriticum aestivum25.8341.6885.89333forward
CNT30225924Chenopodium quinoaHordeum vulgare24.5956.3183.91317forward
CNT30389985Chenopodium quinoaTriticum turgidum23.8930.2986.04308forward
CNT30508545Chenopodium quinoaSolanum lycopersicum9.4629.4786.07122forward
CNT30437887Chenopodium quinoaAegilops tauschii23.894486.36308forward
CNT30667060Chenopodium quinoaTriticum dicoccoides24.5949.9284.86317forward
CNT30471290Chenopodium quinoaSaccharum spontaneum34.649.6783.41446forward
CNT3014998Chenopodium quinoaZea mays21.0248.9282.66271forward
CNT30608385Chenopodium quinoaGossypium raimondii25.9960.9183.88335forward
CNT30218287Chenopodium quinoaKalanchoe fedtschenkoi23.257.6184.95299forward
CNT3066706Chenopodium quinoaLeersia perrieri16.2161.4785.17209forward
CNT30650282Chenopodium quinoaRosa chinensis56.2561.5483.31725forward
CNT30686069Chenopodium quinoaTriticum urartu24.5937.2584.86317forward
CNT30477100Chenopodium quinoaArabidopsis halleri8.5327.8587.27110forward
CNT30368076Chenopodium quinoaSorghum bicolor47.6356.3884.85614forward
CNT30597069Chenopodium quinoaOryza meridionalis25.9916.7485.97335forward
CNT30432398Chenopodium quinoaPapaver somniferum34.7636.982.59448forward
CNT3055182Chenopodium quinoaAmborella trichopoda25.2930.8480.06326forward
CNT30331991Chenopodium quinoaDioscorea rotundata15.5942.4982.09201forward
CNT30101941Chenopodium quinoaOryza rufipogon25.9940.1285.97335forward
CNT30574675Chenopodium quinoaOryza barthii13.4238.3684.39173forward
CNT30496713Chenopodium quinoaDigitaria exilis34.629.6182.96446forward

Expression of CNT30266729

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MQLFYKHNAAILLLTKPPNNHISVSPTINLPANKEIEKERETKKTLILWPIQKHFIYSFWLESSCSLWRRSGHLLY*

>peptide 2 (31 aa)
QEDGEIIFVTQIFHNYYQRAHITFFRLLLGS*

>peptide 3 (31 aa)
MYTKTLQLSASRPTSADTNPMLRHVCRTIFS*

Sequence

>CNT30266729
TCAAGAAGACGGTGAAATTATTTTTGTAACGCAAATATTTCATAACTACTATCAACGAGCACACATTACATTTTTTCGGTTGCTGCTCGGCAGCTGATCC
CTTTCTAGCACTGTAAAAAAACATACATATGCAGCTCTTTTACAAACATAATGCTGCCATTTTACTACTAACAAAACCTCCCAACAACCACATTTCTGTT
TCTCCAACAATCAACTTACCCGCAAACAAAGAAATAGAAAAAGAAAGGGAAACTAAAAAGACATTAATATTGTGGCCCATACAAAAGCATTTTATATATT
CCTTTTGGTTAGAGAGCAGCTGCAGCCTGTGGAGGAGATCCGGGCACTTGCTTTATTGATCAAAAATATTAATCAATGAATTCATAGACTTCACTCGACT
TCTCCGGTTTAAGCTTGGGGCTTCTCCCACTTGAGGGGCTTGACAGTCTCCCATGTGAAGTCTGCGTCGTCCCTACCGAAGTGTCCGTAGGCGGCGGTCT
TCAAGTACCTGCTGCCACCCTTTAGAAGGTCAAGGTTGATGGCAATCATACCGGGCCTGAAGTCGAAGGTCTCCTTGACAATCTTGAGGATCTCTTTGTC
TGGGATCTTTCCGGTTCCGTAGGTGTCAACGAACACAGACAAGGGCTCGGGGACACCAATGGCGTAAGAGATCTGGACAATGCAGCGGCGAGCAAGGCCA
GCAGCAACAATGCTCTTGGCTGCCTGCCTGGCGATGTAAGCACCACTCCTGTCAACCTTGGTTGGGTCCTTTCCAGAGAAAGCACCACCACCGTGGGCAC
CCCATCCTCCGTAGGTGTCGATGATGATCTTACGGCCGGTAAGACCAGCATCACCATGAGGCGGGCACCAAGCTTGGTGGCAAGGACGTGACTGAGGGGC
ATCAACTCAGGGGTCTCATCGGTGGCATACCCAAACATGTGACCTTGGTCACCAGCACCAATCTCCTCGGGGCGTTTGGTAAGGTGACCGTGGACACCCT
GGGCGATATCAGGGCTCTGCTGCTCAATGTATACCAAGACCTTGCAGTTGTCAGCATCAAGACCCACATCGGCAGACACAAACCCAATGTTGCGGCATGT
CTGTCGGACAATCTTCTCGTAGTCTACATTAGCCTTGGTGTTGGTCTTTGTGCAGGTCTCACAAGCAACCTTGCTCTCGGGGTCTTGCTCAAGGCAAGCA
TCAAGCACTGCATCAGAGATCTGATCACATAGCTTGTCTGGGTGTCCCTCGTTCACGGATTCGGAGGTGAATAGGAAGGTGTCGACTGC