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Detailed information on CNT30148817


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 6e-90

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673492Brachypodium distachyonSetaria viridis38.0645.1786.14440forward
CNT30522642Brachypodium distachyonSetaria italica36.2527.1487.35419forward
CNT30641080Brachypodium distachyonNymphaea colorata40.0551.7386.39463forward
CNT30549537Brachypodium distachyonIpomoea triloba22.438.8982.24259forward
CNT30515028Brachypodium distachyonJuglans regia24.9133.9283.68288forward
CNT30372626Brachypodium distachyonArabidopsis thaliana11.3320.4487.02131forward
CNT30266655Brachypodium distachyonChenopodium quinoa38.7539.8683.26448forward
CNT30729048Brachypodium distachyonCorchorus capsularis20.3335.8280.43235forward
CNT30381493Brachypodium distachyonManihot esculenta13.7521.2387.42159forward
CNT30402686Brachypodium distachyonBeta vulgaris11.3321.7290.08131forward
CNT30524807Brachypodium distachyonPhaseolus vulgaris20.5926.9881.93238forward
CNT30628634Brachypodium distachyonVigna unguiculata1625.6986.49185forward
CNT30194995Brachypodium distachyonPisum sativum24.5729.8381.34284forward
CNT30495282Brachypodium distachyonOlea europaea34.4322.681.91398forward
CNT30711739Brachypodium distachyonGlycine max24.5723.7385.56284forward
CNT3047443Brachypodium distachyonPrunus dulcis22.5821.8885.44261forward
CNT30158121Brachypodium distachyonPistacia vera13.7525.4491.19159forward
CNT30638840Brachypodium distachyonCapsicum annuum40.0554.2278.62463forward
CNT3090332Brachypodium distachyonSolanum tuberosum27.9449.6982.66323forward
CNT30181754Brachypodium distachyonSecale cereale24.9145.7993.4288forward
CNT30303722Brachypodium distachyonTriticum aestivum29.3355.9491.74339forward
CNT30225701Brachypodium distachyonHordeum vulgare45.24102.7584.13523forward
CNT30561874Brachypodium distachyonActinidia chinensis25.0932.8883.79290forward
CNT3086110Brachypodium distachyonVigna radiata26.6427.5584.42308forward
CNT30508528Brachypodium distachyonSolanum lycopersicum14.9733.3383.24173forward
CNT30172560Brachypodium distachyonTrifolium pratense39.5367.1181.18457forward
CNT30144304Brachypodium distachyonMedicago truncatula13.4124.1189.03155forward
CNT30441436Brachypodium distachyonAegilops tauschii1636.4990.27185forward
CNT30667060Brachypodium distachyonTriticum dicoccoides21.6339.3791.2250forward
CNT3082721Brachypodium distachyonBrassica juncea15.8363.3285.79183forward
CNT30471855Brachypodium distachyonSaccharum spontaneum40.9251.4186.89473forward
CNT3014405Brachypodium distachyonZea mays22.2347.5987.16257forward
CNT30608385Brachypodium distachyonGossypium raimondii10.9923.0988.19127forward
CNT30218668Brachypodium distachyonKalanchoe fedtschenkoi20.5961.582.35238forward
CNT3066706Brachypodium distachyonLeersia perrieri16.756.7681.87193forward
CNT30650282Brachypodium distachyonRosa chinensis39.0138.2985.14451forward
CNT30624603Brachypodium distachyonDaucus carota24.5743.0383.45284forward
CNT30686785Brachypodium distachyonTriticum urartu31.3135.8490.06362forward
CNT30344080Brachypodium distachyonEragrostis tef7.4429.8691.8686reverse complement
CNT30477100Brachypodium distachyonArabidopsis halleri7.9623.2986.9692forward
CNT30368076Brachypodium distachyonSorghum bicolor35.2137.3786.49407forward
CNT30620815Brachypodium distachyonCajanus cajan13.8421.8985160forward
CNT30597062Brachypodium distachyonOryza meridionalis33.2234.9186.2384forward
CNT30358838Brachypodium distachyonLactuca sativa13.0622.0882.12151forward
CNT30432398Brachypodium distachyonPapaver somniferum21.4520.4380.65248forward
CNT30571189Brachypodium distachyonVitis vinifera23.5344.1684.93272forward
CNT3055147Brachypodium distachyonAmborella trichopoda18.432284.51213forward
CNT3024331Brachypodium distachyonPopulus trichocarpa30.834.1381.74356forward
CNT3035650Brachypodium distachyonCucumis melo33.7428.9385.64390forward
CNT30101810Brachypodium distachyonOryza rufipogon37.5417.1286.18434forward
CNT30574675Brachypodium distachyonOryza barthii13.6735.0383.54158forward
CNT30496713Brachypodium distachyonDigitaria exilis23.4417.9983.03271forward
CNT30116702Brachypodium distachyonOryza nivara29.0732.7286.01336forward
CNT30594881Brachypodium distachyonEragrostis curvula7.2722.7692.8684forward
CNT30174424Brachypodium distachyonVigna angularis40.1457.0783.19464forward
CNT30551132Brachypodium distachyonOryza brachyantha8.0424.0990.3293forward
CNT30113343Brachypodium distachyonFicus carica7.9625.9994.5792forward
CNT30725315Brachypodium distachyonLupinus angustifolius20.8523.9680.5241forward

Expression of CNT30148817

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MTKRPDGFRWKMVFSSRYFSGITGAVLADFSEAGTELGGKHVAEGHELRGLVSGIAKHDALVTGTNVLRALGEVTMHTLGDVR*

>peptide 2 (39 aa)
MNLLPPFFKSRLMLIIPGLKSKFSFTIFRISLSGMVPVP*

>peptide 3 (50 aa)
MTMLVLVHVSQATLLSASCARQASSTASETWSQSLSGWPSFTDSEVKRNVS

>peptide 4 (38 aa)
MSRRRPCCRRPVPGRRQARRQRPGRRACQGGPRSRTRR*

>peptide 5 (38 aa)
MSGDCCSMLTSTLQRSASRPTSSEMKPMLRQVSRTIFS*

Sequence

>CNT30148817
GGACGACTGATAGAGCAAACTGCACAGCTATTGCAGTTTTAGACTCGAAAACGAAGGAAAACCACAAAAGATAACAAAAGACCCGACTAGTATAAACTCA
GCACGTAACTCTGTCTGCCACACCAAAATACCACTCACTAGACGCCAATGCAGCGTCAGTGAAACTCACTTCCAGCAGCAGTACCAGTCCTTAAGCAGAG
GCCTTGTCAAACTTGAGGGGCTTCACCACCTCCCAGGTGAAGTCAGCATCATCACGGCCAAAGTGACCGTAGGCAGCGGTCTTGATGAACCTGTTGCCAC
CCTTCTTCAAGTCAAGGTTGATGCTGATCATACCAGGCCTGAAGTCAAAGTTCTCCTTCACGATCTTCAGAATCTCCTTGTCAGGGATGGTGCCGGTGCC
GTAGGAGTCGACGAAGACAGACAAAGGCTCAGGGACACCAATGGCATAGGAGATCTGCACAATGCAGCGGCGTGCAAGACCACTGGCAATGATGCTTTTG
GCGGCCTGCCTGGCAATGTAGGCACCACCACCGTGGGCTCCCCAGCCACCGTAGGTGTCGATGATGATCTTGCGGCCGGTGAGACCAGCATCACCGTGAG
GGCCACCGATGACAAAGCGGCCTGACGGGTTCAGGTGGAAGATGGTCTTCTCGTCCAGGTACTTCTCAGGGATCACAGGTGCCGTTCTTGCGGACTTCAG
TGAGGCGGGCACCGAGCTTGGTGGCAAGCACGTGGCTGAGGGGCATGAGCTCAGGGGTCTCGTCAGTGGCATAGCCAAACATGATGCCCTGGTCACCGGC
ACCAATGTCCTCAGGGCGCTTGGTGAAGTGACCATGCACACCCTGGGCGATGTCAGGTGACTGCTGCTCAATGTTGACGAGCACCTTGCAGCGGTCAGCA
TCAAGACCAACATCATCAGAGATGAAGCCGATGTTGCGGCAGGTGTCACGAACGATCTTCTCATAGTCAACAGTGGCCTTGGTGGTGATCTCACCGAAAA
CCATGACCATGTTGGTCTTGGTGCATGTCTCGCAGGCGACCTTGCTGTCGGCGTCCTGTGCCAGGCAGGCGTCAAGCACGGCGTCAGAGACCTGGTCGCA
GAGCTTGTCAGGGTGGCCCTCGTTCACGGACTCGGAGGTGAAGAGGAACGTCTCGG