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Detailed information on CNT30561874


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SBQ7|METK3_PETHY, E-value = 7e-132

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672380Actinidia chinensisSetaria viridis47.3952.6485.89418forward
CNT30520816Actinidia chinensisSetaria italica47.3948.3885.89418forward
CNT30639623Actinidia chinensisNymphaea colorata23.8140.3183.81210forward
CNT30549537Actinidia chinensisIpomoea triloba39.3452.185.3347forward
CNT30515028Actinidia chinensisJuglans regia48.0749.9482.08424forward
CNT30698521Actinidia chinensisQuercus lobata30.7348.3185.98271forward
CNT30373104Actinidia chinensisArabidopsis thaliana45.4647.7981.3401forward
CNT30618114Actinidia chinensisSesamum indicum23.746.2482.3209forward
CNT30266655Actinidia chinensisChenopodium quinoa33.6726.4285.86297forward
CNT3021108Actinidia chinensisCitrullus lanatus37.7620.2387.69333forward
CNT30729630Actinidia chinensisCorchorus capsularis51.0254.9584.89450forward
CNT30381460Actinidia chinensisManihot esculenta45.5843.7486.82402forward
CNT30402638Actinidia chinensisBeta vulgaris40.0227.5684.14353forward
CNT30524807Actinidia chinensisPhaseolus vulgaris31.6331.6382.44279forward
CNT30628391Actinidia chinensisVigna unguiculata5038.4583.67441forward
CNT30194995Actinidia chinensisPisum sativum32.8830.4685.52290forward
CNT30495282Actinidia chinensisOlea europaea34.3517.2182.84303forward
CNT30711739Actinidia chinensisGlycine max44.933.0885.61396forward
CNT3047443Actinidia chinensisPrunus dulcis43.7632.3683.42386forward
CNT30158121Actinidia chinensisPistacia vera22.1131.287.69195forward
CNT3090332Actinidia chinensisSolanum tuberosum21.6629.3886.91191forward
CNT30181754Actinidia chinensisSecale cereale30.8443.2484.19272forward
CNT30294498Actinidia chinensisTriticum aestivum47.3952.3283.73418forward
CNT30225924Actinidia chinensisHordeum vulgare58.6291.8381.82517forward
CNT30389985Actinidia chinensisTriticum turgidum46.2640.1284.07408forward
CNT3086110Actinidia chinensisVigna radiata32.225.483.45284forward
CNT30508528Actinidia chinensisSolanum lycopersicum25.5143.3583.56225forward
CNT30174161Actinidia chinensisTrifolium pratense31.5235.2384.53278forward
CNT30144438Actinidia chinensisMedicago truncatula31.5256.8584.17278forward
CNT30437887Actinidia chinensisAegilops tauschii42.453.4383.42374forward
CNT30667060Actinidia chinensisTriticum dicoccoides40.0255.5979.04353forward
CNT30310308Actinidia chinensisCamelina sativa8.0530.7487.3271forward
CNT3082721Actinidia chinensisBrassica juncea10.4331.8389.1392forward
CNT30471290Actinidia chinensisSaccharum spontaneum46.9446.184.3414forward
CNT3013982Actinidia chinensisZea mays10.7732.7693.6895forward
CNT30608385Actinidia chinensisGossypium raimondii45.3572.7386400forward
CNT30218287Actinidia chinensisKalanchoe fedtschenkoi32.5455.382.93287forward
CNT3066706Actinidia chinensisLeersia perrieri23.761.4782.78209forward
CNT30650282Actinidia chinensisRosa chinensis37.327.9388.15329forward
CNT30212612Actinidia chinensisHelianthus annuus7.4827.3992.4266forward
CNT30624603Actinidia chinensisDaucus carota27.136.2187.45239forward
CNT30681758Actinidia chinensisTriticum urartu39.851.4783.19351forward
CNT30349162Actinidia chinensisEragrostis tef30.529.5384.76269forward
CNT30477100Actinidia chinensisArabidopsis halleri32.271.978.52284forward
CNT30368062Actinidia chinensisSorghum bicolor42.5234.1285.07375forward
CNT30620812Actinidia chinensisCajanus cajan26.6418.9285.53235forward
CNT30597069Actinidia chinensisOryza meridionalis46.9420.6983.09414forward
CNT30355133Actinidia chinensisLactuca sativa23.4723.6684.54207forward
CNT30432398Actinidia chinensisPapaver somniferum35.1525.5482.9310forward
CNT30570674Actinidia chinensisVitis vinifera27.8926.0685.77246forward
CNT3055182Actinidia chinensisAmborella trichopoda48.0740.1180.9424forward
CNT3022562Actinidia chinensisPopulus trichocarpa46.8326.4186.92413forward
CNT3035650Actinidia chinensisCucumis melo36.0523.5987.74318forward
CNT30331991Actinidia chinensisDioscorea rotundata26.1948.8484.85231forward
CNT30148817Actinidia chinensisBrachypodium distachyon32.8825.0983.79290forward
CNT30101810Actinidia chinensisOryza rufipogon32.5411.3282.93287forward
CNT30496713Actinidia chinensisDigitaria exilis35.7120.9281.27315forward
CNT30116702Actinidia chinensisOryza nivara32.5427.9582.93287forward
CNT30174424Actinidia chinensisVigna angularis32.234.9383.45284forward
CNT30113343Actinidia chinensisFicus carica13.2733.0590.6117forward
CNT30725315Actinidia chinensisLupinus angustifolius50.2344.0484.2443forward

Expression of CNT30561874

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLTRTLQLSASRPTSSETNPMVRHVSRTIFS*

>peptide 2 (51 aa)
MLLEASSKFGCKDMAQRHKFRGLISGITKHMTLVTSTNVLWTLCKGSVAQC*

>peptide 3 (68 aa)
MILRPVSPASPWGPPMTKRPEGLRWKMVFSSRYFSGMTGLMTCSLRRAPSLVARTWLRGINSGVSSVA*

>peptide 4 (89 aa)
MSSGRFVRALLLNVNQDLAVVSIKTNIIRNKSNGATCVTDDLLIVNITLCSNLSKDHDHVGLSACLTGNLAVRILGKASVKHCIGDLVA*

>peptide 5 (37 aa)
MTMLVLVHVSQATLLSGSWARQASSTASEIWSHSLSG*

>peptide 6 (38 aa)
MSHRQPCCQDPGQGKRQALHRRSGRIACLGDPRSLIQR*

>peptide 7 (38 aa)
LPLPPLLRSRLIAIIPGLKSKFSLTMLRISLSGIFPVP*

>peptide 8 (44 aa)
PAIATPLKIQADSDHTGPEVKVLLDNVEDLLVRNLSSSISVNKN*

Sequence

>CNT30561874
CCTGCCATTGCCACCCCTCTTAAGATCCAGGCTGATAGCGATCATACCGGGCCTGAAGTCAAAGTTCTCCTTGACAATGTTGAGGATCTCCTTGTCAGGA
ATCTTTCCAGTTCCATAAGTGTCAACAAAAACTGACAAAGGCTCAGGAACACCAATGGCATAAGAGACCTGCACGATGCACCTACGAGCAAGCCCATTCG
CTACAATACTCTTGGCAGCTTGCCTGACAATGTAGGCACCACTCCTGTCTACCTTGGTAGGATCCTTCCCGGAGAAAGCTCCACCACCGTGTGCTCCCCA
GCCTCCATAAGTATCAATAATGATCTTACGTCCAGTAAGCCCTGCATCACCATGGGGACCACCAATGACAAAGCGGCCTGAAGGGTTAAGGTGGAAGATG
GTCTTCTCGTCAAGATACTTCTCGGGGATGACAGGCTTAATGACATGCTCCTTGAGGCGAGCTCCAAGTTTGGTTGCAAGGACATGGCTCAGAGGCATAA
ATTCAGGGGTCTCATCAGTGGCATAACCAAACATATGACCCTGGTCACCAGCACCAATGTCCTCTGGACGCTTTGTAAGGGCTCTGTTGCTCAATGTTAA
CCAGGACCTTGCAGTTGTCAGCATCAAGACCAACATCATCAGAAACAAATCCAATGGTGCGACATGTGTCACGGACGATCTTCTCATAGTCAATATCACC
CTTTGTAGTAATCTCTCCAAAGACCATGACCATGTTGGTCTTAGTGCATGTCTCACAGGCAACCTTGCTGTCAGGATCCTGGGCAAGGCAAGCGTCAAGC
ACTGCATCGGAGATCTGGTCGCATAGCTTGTCTGGGTGACCCTCGTTCACTGATTCAGAGGTAAATAGGAAGGTCTCCATTC