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Detailed information on CNT30698521


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 8e-117

BLAST vs NONCODE:
NONPOPT000587, E-value = 4e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Quercus lobataSetaria viridis47.7734.5884.33268forward
CNT30521359Quercus lobataSetaria italica47.7740.6783.96268forward
CNT30639623Quercus lobataNymphaea colorata31.7334.1785.96178forward
CNT30549537Quercus lobataIpomoea triloba40.6434.2387.28228forward
CNT30515028Quercus lobataJuglans regia51.8734.2881.79291forward
CNT30374620Quercus lobataArabidopsis thaliana25.3116.485.21142forward
CNT30618114Quercus lobataSesamum indicum31.9139.685.47179forward
CNT30266729Quercus lobataChenopodium quinoa42.618.5482.85239forward
CNT3021108Quercus lobataCitrullus lanatus44.0315.0185.83247forward
CNT30729630Quercus lobataCorchorus capsularis47.7732.7288.06268forward
CNT30381460Quercus lobataManihot esculenta47.7729.1685.45268forward
CNT30402638Quercus lobataBeta vulgaris52.2322.8782.94293forward
CNT30524807Quercus lobataPhaseolus vulgaris30.8419.6185.55173forward
CNT30628391Quercus lobataVigna unguiculata44.7421.8884.86251forward
CNT30194995Quercus lobataPisum sativum23.8914.0885.07134forward
CNT30708643Quercus lobataGlycine max32.833.1586.96184forward
CNT3047442Quercus lobataPrunus dulcis33.5131.0288.3188forward
CNT30158121Quercus lobataPistacia vera26.223.5287.76147forward
CNT30638840Quercus lobataCapsicum annuum24.9616.3985140forward
CNT3090332Quercus lobataSolanum tuberosum34.2229.5483.85192forward
CNT30181754Quercus lobataSecale cereale45.2840.3882.68254forward
CNT30294498Quercus lobataTriticum aestivum47.9533.6782.9269forward
CNT30225924Quercus lobataHordeum vulgare45.6345.4783.2256forward
CNT30389985Quercus lobataTriticum turgidum47.9526.4582.53269forward
CNT30561874Quercus lobataActinidia chinensis48.3130.7385.98271forward
CNT30508545Quercus lobataSolanum lycopersicum31.9143.2484.36179forward
CNT30172560Quercus lobataTrifolium pratense25.6721.1586.11144forward
CNT30146819Quercus lobataMedicago truncatula35.2926.3683.84198forward
CNT30437887Quercus lobataAegilops tauschii47.9538.4382.9269forward
CNT30667060Quercus lobataTriticum dicoccoides42.0737.1781.78236forward
CNT30471290Quercus lobataSaccharum spontaneum36.0122.4988.12202forward
CNT3014998Quercus lobataZea mays29.2329.684.76164forward
CNT30608385Quercus lobataGossypium raimondii45.6346.5586.72256forward
CNT30218287Quercus lobataKalanchoe fedtschenkoi4144.3283.91230forward
CNT3066706Quercus lobataLeersia perrieri18.8931.1884.91106forward
CNT30650282Quercus lobataRosa chinensis34.0516.2188.48191forward
CNT30626924Quercus lobataDaucus carota49.221.8983.33276forward
CNT30681758Quercus lobataTriticum urartu47.9539.4483.27269forward
CNT30349162Quercus lobataEragrostis tef36.0122.1788.12202forward
CNT30477100Quercus lobataArabidopsis halleri45.2864.380.31254forward
CNT30368062Quercus lobataSorghum bicolor36.0118.3886.14202forward
CNT30620815Quercus lobataCajanus cajan21.7516.6986.07122forward
CNT30597069Quercus lobataOryza meridionalis44.2112.3987.1248forward
CNT30355133Quercus lobataLactuca sativa28.1618.0685.44158forward
CNT30432398Quercus lobataPapaver somniferum41.1819.0386.58231forward
CNT30571189Quercus lobataVitis vinifera26.3824.0391.22148forward
CNT3055182Quercus lobataAmborella trichopoda37.4319.8781.9210forward
CNT3025891Quercus lobataPopulus trichocarpa47.7734.485.82268forward
CNT3035650Quercus lobataCucumis melo45.118.7784.19253forward
CNT30331991Quercus lobataDioscorea rotundata35.8342.4984.58201forward
CNT30101941Quercus lobataOryza rufipogon39.5726.5986.94222forward
CNT30496713Quercus lobataDigitaria exilis39.0414.5485.39219forward
CNT30116702Quercus lobataOryza nivara24.9613.6384.29140forward
CNT30174546Quercus lobataVigna angularis51.5237.7880.28289forward
CNT30113329Quercus lobataFicus carica31.0216.1685.63174forward
CNT30725315Quercus lobataLupinus angustifolius47.7726.6485.82268forward

Expression of CNT30698521

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MAYETCTMHLRASPLATMLFAACLTTYAPLLSTLVGSFPEKAPPPWAPHPP*

>peptide 2 (53 aa)
MTKRPDGYFSGMTGLITCSLRSAAISSLVTVSSCCVEIRTVCTRTGTIAPLSL*

>peptide 3 (30 aa)
MGSPSTISINDDFAASETCITMRSTNDKAP*

>peptide 4 (36 aa)
KCQQIQIMAQEHQWHMRLAQCTSEQAHWQQCSLQPA*

>peptide 5 (86 aa)
MLFKISSNLIISNSFIVLCGNKDSVYSYWNHSTIVIVVFHGDLSFTIRSQPGAGPIFTNISKACTKLGSQNMAQRHKLRGLICSIAK

Sequence

>CNT30698521
TAAGTGTCAACAAATACAGATAATGGCTCAGGAACACCAATGGCATATGAGACTTGCACAATGCACCTCCGAGCAAGCCCATTGGCAACAATGCTCTTTG
CAGCCTGCCTAACAACATATGCTCCACTCCTGTCAACCTTGGTAGGGTCCTTTCCAGAGAAGGCACCACCACCATGGGCTCCCCATCCACCATAAGTATC
AATGATGATTTTGCGGCCAGTGAGACCTGCATCACCATGAGGTCCACCAATGACAAAGCGCCCTGATGGGTACTTCTCAGGGATGACAGGCTTGATAACA
TGCTCTTTAAGATCAGCAGCAATCTCATCATTAGTAACAGTTTCATCGTGCTGTGTGGAAATAAGGACAGTGTGTACTCGTACTGGAACCATAGCACCAT
TGTCATTGTAGTATTCCACGGTGACTTGAGTTTTACCATCAGGTCTCAACCAGGGGCAGGTCCCATTTTTACGAACATCAGTAAGGCGTGCACCAAGCTT
GGTAGCCAAAACATGGCTCAGAGGCATAAACTCAGGGGTCTCATCTGTAGCATAGCCAAAC