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Detailed information on CNT30641080


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 1e-127

BLAST vs NONCODE:
NONPOPT000585, E-value = 2e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Nymphaea colorataSetaria viridis26.0330.0689.27233forward
CNT30520816Nymphaea colorataSetaria italica29.530.5688.26264forward
CNT30549537Nymphaea colorataIpomoea triloba33.7445.3582.45302forward
CNT30515028Nymphaea colorataJuglans regia24.0225.3281.4215forward
CNT30373104Nymphaea colorataArabidopsis thaliana31.1733.2583.87279forward
CNT30618114Nymphaea colorataSesamum indicum17.3234.2983.87155forward
CNT30266631Nymphaea colorataChenopodium quinoa60.7862.181.99544forward
CNT3021108Nymphaea colorataCitrullus lanatus31.1716.9586.38279forward
CNT30729630Nymphaea colorataCorchorus capsularis19.3321.1286.13173forward
CNT30381493Nymphaea colorataManihot esculenta31.1737.2584.95279forward
CNT30402638Nymphaea colorataBeta vulgaris31.1721.7886.02279forward
CNT30524807Nymphaea colorataPhaseolus vulgaris30.9531.4183.03277forward
CNT30628634Nymphaea colorataVigna unguiculata31.1738.7583.87279forward
CNT30490001Nymphaea colorataOlea europaea25.746.3780.87230forward
CNT30712616Nymphaea colorataGlycine max67.0473.881.83600forward
CNT3047443Nymphaea colorataPrunus dulcis21.7916.3586.15195forward
CNT30158121Nymphaea colorataPistacia vera16.9824.3288.82152forward
CNT30638840Nymphaea colorataCapsicum annuum66.0369.280.2591forward
CNT3090332Nymphaea colorataSolanum tuberosum25.1434.6282.22225forward
CNT30188823Nymphaea colorataSecale cereale33.335.1484.56298forward
CNT30303722Nymphaea colorataTriticum aestivum33.349.1784.9298forward
CNT30225701Nymphaea colorataHordeum vulgare42.5774.8581.36381forward
CNT30389985Nymphaea colorataTriticum turgidum29.7226.1686.09266forward
CNT30172560Nymphaea colorataTrifolium pratense67.0488.1181.17600forward
CNT30144304Nymphaea colorataMedicago truncatula30.8442.9282.61276forward
CNT30441436Nymphaea colorataAegilops tauschii27.0447.7386.36242forward
CNT30667060Nymphaea colorataTriticum dicoccoides26.8237.884.17240forward
CNT30471290Nymphaea colorataSaccharum spontaneum26.0325.9588.84233forward
CNT3013982Nymphaea colorataZea mays20.7864.1489.78186forward
CNT30218668Nymphaea colorataKalanchoe fedtschenkoi26.8262.0286.67240forward
CNT3066706Nymphaea colorataLeersia perrieri14.337.6585.16128forward
CNT30650282Nymphaea colorataRosa chinensis36.9828.184.29331forward
CNT30624603Nymphaea colorataDaucus carota27.0436.6785.95242forward
CNT30686785Nymphaea colorataTriticum urartu29.9426.5385.07268forward
CNT30349162Nymphaea colorataEragrostis tef29.8329.3186.89267forward
CNT30367696Nymphaea colorataSorghum bicolor34.7536.1683.92311forward
CNT30620812Nymphaea colorataCajanus cajan39.7828.6680.34356forward
CNT30597069Nymphaea colorataOryza meridionalis26.711.9487.03239forward
CNT30358838Nymphaea colorataLactuca sativa22.3529.2484200forward
CNT30432398Nymphaea colorataPapaver somniferum34.0825.1280.98305forward
CNT30570674Nymphaea colorataVitis vinifera34.5332.7382.2309forward
CNT3024331Nymphaea colorataPopulus trichocarpa35.4230.3982.97317forward
CNT3035650Nymphaea colorataCucumis melo31.1720.786.38279forward
CNT30148817Nymphaea colorataBrachypodium distachyon51.7340.0586.39463forward
CNT30101681Nymphaea colorataOryza rufipogon34.4112.0284.42308forward
CNT30574675Nymphaea colorataOryza barthii17.4334.5984.62156forward
CNT30496713Nymphaea colorataDigitaria exilis34.7520.6583.92311forward
CNT30174546Nymphaea colorataVigna angularis18.3221.4483.54164forward
CNT30551132Nymphaea colorataOryza brachyantha10.3924.0988.1793forward
CNT30113329Nymphaea colorataFicus carica27.9323.2182.8250forward
CNT30725315Nymphaea colorataLupinus angustifolius31.0627.6384.17278forward

Expression of CNT30641080

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPTDSTYFSIIKLGKRTQIAEREHQRRKNQAAGFSHLRGFTTSHVKSGSSLPK*

>peptide 2 (30 aa)
MQRRARPLATMLLAAWRTMYAPPPWAPQPP*

>peptide 3 (63 aa)
MTKRPDGLRWKMVFSSRYFSGMTALMTCSFRSAAISSLVTVSSCWVEMRTVWTRTGTMAPLSL*

>peptide 4 (54 aa)
MEDGLLVKVLFRDDRLNDMLLQVSSDFIVGHRLVVLGGNENGVDADGNHGTIVIV

Sequence

>CNT30641080
CCCGTTTGCTTAACAGAGAAGACCTTCAACGCGTCCTGACAGAAGTAGTAGGCACAACACAAGGATACTAATAAAACAAGGGAAAAACATTGGCTTTAAC
CACAAAAAATAGCACAGCAGTTCTTGTAACGCCTTACTGACAGAGGCCGTAGGCACAACTCAAGGATACTAAGAAAACAAGCGAAAACTAAAATAGATAA
TGCCAACTGACTCGACCTATTTTTCGATAATAAAACTTGGAAAAAGGACCCAAATAGCCGAGAGAGAACACCAGAGGAGAAAGAATCAAGCAGCGGGCTT
CTCCCACTTGAGGGGCTTCACCACCTCCCATGTGAAGTCGGGGTCGTCCCTGCCGAAGTGACCATAGGCAGCGGTCTTCAAGTACCTGTTCCCACCCTTC
TTCAGCTCCAAGTTGATGGAGATCATCCCCGGTCTGAAGTCGAAGTTCTCCTTCACGATCTTCAGGATCTCCTTGTCAGGGATTTTCCCAGTGCCGTAGG
TGTCCACGAACACTGACAGAGGCTCAGGGACACCGATTGCGTAGGAGACCTGAACAATGCAGCGGCGTGCAAGACCGTTGGCAACAATGCTCTTGGCAGC
CTGGCGGACAATGTACGCACCACCACCGTGGGCTCCCCAACCACCATAGGTGTCGATGATGATCTTCCGACCAGTCAGCCCAGCATCACCATGAGGACCA
CCGATGACGAAGCGGCCTGACGGGTTAAGATGGAAGATGGTCTTCTCGTCAAGGTACTTTTCCGGGATGACCGCCTTAATGACATGCTCCTTCAGGTCAG
CAGCGATTTCATCGTTGGTCACCGTCTCGTCGTGCTGGGTGGAAATGAGAACGGTGTGGACGCGGACGGGAACCATGGCACCATTGTCATTGTAG