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Detailed information on CNT30101941


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0DKY4|METK1_ORYSJ, E-value = 5e-89

BLAST vs NONCODE:
NONPOPT000587, E-value = 7e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672380Oryza rufipogonSetaria viridis51.9854.6691.94434forward
CNT30521184Oryza rufipogonSetaria italica51.7418.7991.67432forward
CNT30549537Oryza rufipogonIpomoea triloba51.3864.4181.59429forward
CNT30698521Oryza rufipogonQuercus lobata26.5939.5786.94222forward
CNT30372626Oryza rufipogonArabidopsis thaliana50.1865.3779.71419forward
CNT30618114Oryza rufipogonSesamum indicum26.4748.8981.9221forward
CNT30266729Oryza rufipogonChenopodium quinoa40.1225.9985.97335forward
CNT3021108Oryza rufipogonCitrullus lanatus36.1718.3581.13302forward
CNT30729630Oryza rufipogonCorchorus capsularis37.9638.7181.07317forward
CNT30381458Oryza rufipogonManihot esculenta38.3245.5880320forward
CNT30402638Oryza rufipogonBeta vulgaris31.6220.6187.12264forward
CNT30524807Oryza rufipogonPhaseolus vulgaris43.7141.3880365forward
CNT30628391Oryza rufipogonVigna unguiculata40.3629.3882.79337forward
CNT30708643Oryza rufipogonGlycine max34.9752.6180.48292forward
CNT30189384Oryza rufipogonSecale cereale50.5453.6983.18422forward
CNT30301451Oryza rufipogonTriticum aestivum39.6492.4688.22331forward
CNT30225924Oryza rufipogonHordeum vulgare41.261.184.59344forward
CNT30389985Oryza rufipogonTriticum turgidum37.2530.5886.17311forward
CNT30508545Oryza rufipogonSolanum lycopersicum21.0842.5184.09176forward
CNT30437887Oryza rufipogonAegilops tauschii37.2544.4386.5311forward
CNT30667060Oryza rufipogonTriticum dicoccoides41.9255.1285.43350forward
CNT30471290Oryza rufipogonSaccharum spontaneum51.9848.3391.71434forward
CNT3014998Oryza rufipogonZea mays32.4648.9287.45271forward
CNT30608385Oryza rufipogonGossypium raimondii41.9263.6482.86350forward
CNT30218287Oryza rufipogonKalanchoe fedtschenkoi36.1758.1982.78302forward
CNT30686069Oryza rufipogonTriticum urartu40.1239.3785.67335forward
CNT30349162Oryza rufipogonEragrostis tef25.7523.690.7215forward
CNT30477100Oryza rufipogonArabidopsis halleri13.1727.8588.18110forward
CNT30367696Oryza rufipogonSorghum bicolor51.8650.3590.99433forward
CNT30597163Oryza rufipogonOryza meridionalis70.1898.6595.05586forward
CNT30432398Oryza rufipogonPapaver somniferum50.334.681.9420forward
CNT3055182Oryza rufipogonAmborella trichopoda36.8929.1481.17308forward
CNT3022562Oryza rufipogonPopulus trichocarpa39.2820.9782.93328forward
CNT30331991Oryza rufipogonDioscorea rotundata24.7943.7685.02207forward
CNT30496713Oryza rufipogonDigitaria exilis51.7428.6991.9432forward
CNT30116792Oryza rufipogonOryza nivara65.0384.4595.4543forward
CNT30113329Oryza rufipogonFicus carica21.216.4385.88177forward
CNT30725315Oryza rufipogonLupinus angustifolius40.1233.383.88335forward

Expression of CNT30101941

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MMIMPGLKSKFSFTILRISLSGILPVPYVSTNTDSGSGTPMAYDTWTMQRRARPLATMLLAACLATYAPLRSTLVGSLPEKAPPP*

>peptide 2 (38 aa)
DQQTCCMLNFKRHKGHFQLQQTHELSTHRSPGNHIGIE*

>peptide 3 (32 aa)
MAAGGRLRITMLSSEETKHHNGTEQKLPKGSF*

Sequence

>CNT30101941
GACCAACAAACATGTTGCATGCTCAACTTCAAAAGGCACAAAGGTCACTTCCAGCTTCAGCAAACACATGAACTGAGCACTCACAGATCACCAGGGAACC
ATATAGGGATAGAATAACCAAAACATAGGAGGTTTCATTTCTTCTTCTCAAAGTAGTGTAGCATCTTTCCTTCTTTCACCATTACATAAGCTTAAGCAAT
AACAGATAACAAATCATCCTCCTCCTCCTCTAGGTAAAATATTCAAACACAATACCCTTATAAGTACTTATTATTAGGAAAGTAGCGTGCATGGGCATAA
ATGGCAGCGGGGGGCAGGTTAAGAATCACAATGCTGAGCAGCGAGGAAACAAAACACCATAATGGGACAGAGCAAAAGCTTCCGAAAGGGAGCTTTTAGG
GGCTTCACCACCTCCCAGGTGAAGTCTGGGTCGTCCCTTCCAAAGTGACCGTAAGCCGCCGTCTTGAGGTAGCGTCCGTTGCCGCCTTTCTTGAGGTCAA
GGTTGATGATGATCATGCCAGGCCTGAAGTCGAAGTTCTCCTTCACAATCTTGAGGATCTCCTTGTCAGGGATCCTGCCAGTGCCGTATGTGTCGACGAA
TACGGACAGTGGCTCTGGGACACCGATGGCGTATGATACTTGGACAATGCAGCGGCGAGCAAGGCCACTAGCAACAATGCTCTTGGCAGCTTGCCTTGCG
ACGTATGCTCCACTGCGGTCAACCTTGGTTGGGTCCTTGCCAGAGAAGGCACCACCACCGTGAGCTCCCCAGCCACCATAAGTGTCAATGATGATCTTCC
GGCCAGTGAGACCAGCATCACCATGAGGTCCGCCA