« Back to Prunus persica search


Detailed information on CNT30155236


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39613|CYPH_CATRO, E-value = 1e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517653Prunus persicaJuglans regia33.6715.6286.62299forward
CNT30702610Prunus persicaQuercus lobata14.0823.9593.6125forward
CNT3019668Prunus persicaCitrullus lanatus9.6820.2890.786forward
CNT3071229Prunus persicaQuercus suber24.2129.1391.63215forward
CNT30632225Prunus persicaVigna unguiculata33.3361.0385.81296forward
CNT30201798Prunus persicaPisum sativum15.6559.6687.05139forward
CNT30506710Prunus persicaNicotiana attenuata8.6727.890.9177forward
CNT30710754Prunus persicaGlycine max11.3738.8595.05101forward
CNT3043301Prunus persicaPrunus dulcis40.3250.2198.88358forward
CNT30167187Prunus persicaPistacia vera52.5968.6883.3467forward
CNT3090362Prunus persicaSolanum tuberosum26.9150.184.1239forward
CNT30303130Prunus persicaTriticum aestivum20.9557.7684.41186forward
CNT30569495Prunus persicaActinidia chinensis28.8345.2387.11256forward
CNT3084160Prunus persicaVigna radiata33.3334.4687.16296forward
CNT30145071Prunus persicaMedicago truncatula28.654.6281.89254forward
CNT30240409Prunus persicaAvena sativa3340.5384.98293forward
CNT30667711Prunus persicaTriticum dicoccoides22.6429.6584.08201forward
CNT30312502Prunus persicaCamelina sativa13.8534.7582.11123forward
CNT3075586Prunus persicaBrassica juncea18.1330.4383.85161forward
CNT30597524Prunus persicaFraxinus excelsior9.5740.0985.8885forward
CNT30140197Prunus persicaLolium perenne33.3337.0582.43296forward
CNT30653963Prunus persicaRosa chinensis33.4535.793.6297forward
CNT30128639Prunus persicaCorymbia citriodora13.2923.9483.05118forward
CNT30624974Prunus persicaDaucus carota4251.2482.31373forward
CNT30686175Prunus persicaTriticum urartu22.6426.2784.08201forward
CNT30364838Prunus persicaSorghum bicolor11.3720.1685.15101forward
CNT30706413Prunus persicaPrunus avium20.8356.0696.76185forward
CNT3023361Prunus persicaPopulus trichocarpa32.5544.1280.28289forward
CNT3035490Prunus persicaCucumis melo43.0277.6483.25382forward
CNT30100456Prunus persicaOryza rufipogon8.1121.8887.572forward
CNT30175854Prunus persicaVigna angularis23.261.6885.44206forward
CNT30724737Prunus persicaLupinus angustifolius15.7720.7189.29140forward

Expression of CNT30155236

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MTMRPAGWPPIVMSKKTLGFEAIDENFEVLFGSFTKRFE

>peptide 2 (38 aa)
MKNKENKINNWRIKPILFKDNSSVYHKIRVSDQKQQSN*

Sequence

>CNT30155236
CGAGCACAATAATACTTAGAGGCATTAGGCAATTATAGAATAAAAAATTGAAATGAAAAATAAAGAAAATAAGATAAACAATTGGAGAATAAAACCTATT
TTATTTAAGGATAACAGCTCAGTTTATCACAAAATAAGAGTCTCAGATCAGAAACAGCAGAGCAATTAGACATCCAAAAAAAAAAGGAAGACGACCATAG
TGATAATAATAAGGTCCATAAACCAAACCCTAATCAGACCCCAGCCTACTAAAAACCGAAATTCGAAAAAGTAAAGGCAGACCGACTCATAATAACAGAG
AGATAAACGATGACGTTTCCATCATCGTCAGAGCACCGAGTAAACGGACTCGTCTAGGAGAGCTGGCCGCAGTCAGCAACCACCACTGGCCTGGAGGTCC
TGCCGGAGCTCGACCCAACCTTCTCGATGTTCTTCACAACATCGAGCCCCTCGGTCACTTGACCGAACACGACGTGCTTGCCGTCGAGCCACTCGGTCTT
GGCCGTGCAGACGAAGAACTGAGATCCGTTGGTCCGGTGTGCTTCTTGATGAAGTTCTCATCGGCGAACTTGGCGCCGTAGATCGACTCGCCTCCGGTGC
CGTTTCCGGCGGTGAAGTCACCTCCCTGGCACATGAACCCTGGGATCACTCGGTGGAAGGAGGAGCCCTTGTAGTGCAGGGGCTTGCCGCTGCGGCCAGC
GCCCTTCTCTCCGGTGCAGAGAGCCCTGAAGTTCTCGGCGGTGCGGGGGGTGGTGTCGGCGAAGAGCTCCATGACGATGCGGCCGGCAGGCTGGCCTCCG
ATCGTCATGTCGAAGAAGACCTTAGGGTTTGAAGCCATTGATGAGAATTTCGAGGTTTTGTTTGGATCGTTCACGAAGAGATTTGAGG