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Detailed information on CNT30517653


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39613|CYPH_CATRO, E-value = 2e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671343Juglans regiaSetaria viridis11.3437.7481.11217forward
CNT30640933Juglans regiaNymphaea colorata9.0422.6784.39173forward
CNT30702610Juglans regiaQuercus lobata18.2967.0586.86350forward
CNT3071229Juglans regiaQuercus suber13.7435.6489.73263forward
CNT30632225Juglans regiaVigna unguiculata15.1559.7983.45290forward
CNT30201798Juglans regiaPisum sativum757.5182.84134forward
CNT30506710Juglans regiaNicotiana attenuata4.4931.0589.5386forward
CNT30710754Juglans regiaGlycine max11.0881.5487.26212forward
CNT3043301Juglans regiaPrunus dulcis15.6241.9486.29299forward
CNT30167177Juglans regiaPistacia vera19.5452.3883.96374forward
CNT3090362Juglans regiaSolanum tuberosum12.5450.3185.83240forward
CNT30303130Juglans regiaTriticum aestivum11.6569.2582.96223forward
CNT30568322Juglans regiaActinidia chinensis7.2136.886.96138forward
CNT3084160Juglans regiaVigna radiata15.4634.4683.78296forward
CNT30145071Juglans regiaMedicago truncatula728.8282.84134forward
CNT30442485Juglans regiaAegilops tauschii11.6525.7283.41223forward
CNT30240409Juglans regiaAvena sativa12.7533.7587.3244forward
CNT30667711Juglans regiaTriticum dicoccoides11.3932.1583.03218forward
CNT30312502Juglans regiaCamelina sativa11.8664.1279.74227forward
CNT30140197Juglans regiaLolium perenne12.1729.1689.27233forward
CNT3010238Juglans regiaZea mays15.9430.8781.64305forward
CNT30653963Juglans regiaRosa chinensis24.6656.7385.17472forward
CNT30624974Juglans regiaDaucus carota12.7533.5281.97244forward
CNT30686005Juglans regiaTriticum urartu11.6563.3583.41223forward
CNT30364404Juglans regiaSorghum bicolor11.2330.882.33215forward
CNT30155236Juglans regiaPrunus persica15.6233.6786.62299forward
CNT30706413Juglans regiaPrunus avium7.4743.3390.21143forward
CNT3035490Juglans regiaCucumis melo15.5760.5781.54298forward
CNT30175854Juglans regiaVigna angularis10.5560.4884.16202forward
CNT30724737Juglans regiaLupinus angustifolius7.8422.1985.33150forward

Expression of CNT30517653

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MENFWAYGPRTPQYIRHQQCSGAAPHPKGFIKRIRLG*

>peptide 2 (70 aa)
VTKYSLQKLLRCLYLKKNMENHRLTIFSKAIFKKKWKIFGPMDPVLHNTSGINNAVVRRHIPKALSKESG*

>peptide 3 (35 aa)
MKNWDPLVPGPALAMDRIPGPVCFLMKFSSANLAP*

>peptide 4 (32 aa)
CHQIFPPKTFEMFISKKKYGKSQVDDIFEGDF*

>peptide 5 (91 aa)
MSIRSKSAFLQTIISAAKEESDRQTETHPSLQTFTKISVLFKKVPHFSSHHSKKVLIDLPVEWVTKTQFHKTSSIARTMNITINSMTPKRH*

>peptide 6 (30 aa)
MDSPPVPFPAVKSPPWHMNPGITRWKDEPL*

>peptide 7 (31 aa)
MQWCGATSQRLYQKNQARVEKDHHNFRKESC*

Sequence

>CNT30517653
CTGTCACCAAATATTCCCTCCAAAAACTTTTGAGATGTTTATATCTAAAAAAAAATATGGAAAATCACAGGTTGACGATATTTTCGAAGGCGATTTTTAA
AAAGAAATGGAAAATTTTTGGGCCTATGGACCCCGTACTCCACAATACATCAGGCATCAACAATGCAGTGGTGCGGCGCCACATCCCAAAGGCTTTATCA
AAAGAATCAGGCTAGGGTAGAAAAGGATCATCATAATTTTAGAAAAGAATCATGTTAAACATAAATTTTTTGATGAATCATGTTAAACATAAACATATCG
AATATCATCGATAATGAATGATCACAATAACTTGAGCACAACGCTATATATATATATATATATATATATCTAAAATTATATACACGTATTATCAACAGCA
CTGGGGACTTCAAACAAAAAGTCGTAGACATCACTATCACCCACGAGTCCATACTTATCCCTCCCTTGCTTTTGTCGTCTTCTTCACCTCCGACATTATA
ACATTTTATCTGCCACACCCTCTCTTCCTCAAGAACCAGCCCCCCCTAAACACCTGAGAATCTTTCCAGTCAAGCCATCACCTTTCCACCCCCATCGTTT
AATCCCTCTGTTTTACATTTCTACCGCTAGATATCAAATACTTATTTAACATCATTTCTCTTCACACTGAAAACAATATCTAGATAAGCATCATATCCAC
AAACCATTAGCTGTAAAGGAAGATGCATGTCAATAAGGAGTAAATCAGCATTCCTACAAACTATTATATCAGCTGCAAAGGAAGAATCAGACAGACAAAC
AGAAACCCATCCATCACTTCAAACGTTCACAAAGATAAGTGTCTTATTTAAAAAGGTACCTCATTTTTCATCACATCATAGTAAAAAAGTCTTAATTGAT
CTACCAGTGGAATGGGTCACAAAAACCCAGTTCCATAAGACCAGTTCCATAGCAAGAACCATGAACATAACCATAAACTCGATGACACCAAAACGACACT
AGACCATGTTAAACCGACACCCCAATAGATAAACAAAAGAAAAAAAAGACCTTGATCATATTATTATTAGATAATAGTTAGATCTAAGAGAGTTGACCAC
AGTCCTGAACGACCACGGGCTTCGAGGTCCTTCCAGAGCTGGACCCAACCTTCTCGATCGCCTTCACAACATCCAGACCCTCGATCCCCTTCCCGAACAC
GACGTGCTTGCCGTCGAGCCACTCGGTCTTGGCGGTACAGATGAAGAACTGGGACCCATTGGTGCCGGGCCCAGCATTAGCCATGGATAGGATTCCGGGG
CCGGTGTGCTTCTTGATGAAGTTCTCGTCGGCGAACTTGGCGCCGTAGATGGACTCTCCACCGGTTCCGTTCCCAGCGGTGAAGTCACCGCCCTGGCACA
TGAACCCCGGGATCACGCGGTGGAAGGACGAACCCTTGTAGTGAAGGGGCTTGCCACTTCGACCCGTACCCTTCTCACCGGTGCAAAGGGCCCTGAAGTT
CTCCGCGGTTCTAGGAGTGGTGTCGGCATAGAGCTCAATAACGACACGGCCGACAGGTTGGCCGCCGATGGCCATGTCGAAGAAAACCTTGGGGTTTGAG
GCCGCCATCGAAGCAGAGCAGAAATCTTGAAGAGATTGTTTTAGGAAGAACTAAAGAAGTAGATGATGGTTAGGGTTCGAGAGGGGCAATGCGGCTGACT
ATATAGGGGGGAAAAAGCTGTGGAAGCCAGGAAGGTTGTGTTGAACCGTTGGATGGAGAAACGTGGGAGTATCGGGACGGTGACATGAGTAACCATGGTT
GGACTAGAAGTTGACTAGGGTTAATGAGGGATCCTAGGCTCTACGGTGGTATATGCTGTGTCCTTTTTTTTTTTTTTTTTTTGGAAGAGAGATGATTTGT
GTCGTTATTCGGGG