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Detailed information on CNT3043301


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39613|CYPH_CATRO, E-value = 1e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517653Prunus dulcisJuglans regia41.9415.6286.29299forward
CNT30702610Prunus dulcisQuercus lobata17.5323.9594.4125forward
CNT3019668Prunus dulcisCitrullus lanatus12.220.5291.9587forward
CNT3071229Prunus dulcisQuercus suber30.1529.1391.63215forward
CNT30632225Prunus dulcisVigna unguiculata41.5161.0386.49296forward
CNT30198931Prunus dulcisPisum sativum25.1152.879.89179forward
CNT30507180Prunus dulcisNicotiana attenuata22.4423.680.62160forward
CNT30710754Prunus dulcisGlycine max14.1738.8596.04101forward
CNT30167177Prunus dulcisPistacia vera41.9441.8885.28299forward
CNT30638631Prunus dulcisCapsicum annuum26.9325.4683.85192forward
CNT3090362Prunus dulcisSolanum tuberosum33.5250.184.52239forward
CNT30303130Prunus dulcisTriticum aestivum26.0957.7685.48186forward
CNT30569495Prunus dulcisActinidia chinensis35.945.2387.5256forward
CNT3084160Prunus dulcisVigna radiata41.5134.4687.84296forward
CNT30145071Prunus dulcisMedicago truncatula35.6254.6281.89254forward
CNT30442485Prunus dulcisAegilops tauschii24.420.0785.06174forward
CNT30240409Prunus dulcisAvena sativa41.0940.5385.67293forward
CNT30667711Prunus dulcisTriticum dicoccoides28.1929.6585.07201forward
CNT30312502Prunus dulcisCamelina sativa17.2534.7582.11123forward
CNT3075586Prunus dulcisBrassica juncea22.5830.4383.85161forward
CNT30597524Prunus dulcisFraxinus excelsior11.9240.0985.8885forward
CNT30140197Prunus dulcisLolium perenne41.5137.0583.11296forward
CNT3010238Prunus dulcisZea mays26.3719.0383.51188forward
CNT30653963Prunus dulcisRosa chinensis41.6535.793.94297forward
CNT30128639Prunus dulcisCorymbia citriodora17.6725.5683.33126forward
CNT30624974Prunus dulcisDaucus carota41.3740.5284.75295forward
CNT30686175Prunus dulcisTriticum urartu28.1926.2785.07201forward
CNT30364838Prunus dulcisSorghum bicolor14.1720.1685.15101forward
CNT30155236Prunus dulcisPrunus persica50.2140.3298.88358forward
CNT30706413Prunus dulcisPrunus avium46.2810095.76330forward
CNT3023361Prunus dulcisPopulus trichocarpa30.0132.6782.24214forward
CNT3035490Prunus dulcisCucumis melo42.3661.3884.11302forward
CNT30100456Prunus dulcisOryza rufipogon10.6623.188.1676forward
CNT30175854Prunus dulcisVigna angularis28.8961.6886.41206forward
CNT30724737Prunus dulcisLupinus angustifolius19.6420.7187.86140forward

Expression of CNT3043301

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MTMRPAGWPPIVMSKKTLGFEAIDENFEGLFGSFTKRFEENESNDA*

Sequence

>CNT3043301
GGAGAATAAAACCTATTTTATTTAAGGATAACAGCTCAGTTTATCACAAAATAAGAGTCTCAGATCAGAAACAGCAGAGCAATTAGACATCCAAAAAAAA
AAAAAAAAGGAAGACGACCATAGTGATAATAATAAGGTCCATAAACCAAACCCTAATCAGACCCCAGCCTACTAAAAACCGAAATTCGAAAAAGTAAAGG
CAGACCGACTCATAATAACAGAGAGATAAACGACGGCGTTTCCATCATCGTCACAGCACCGAGTAAACGGACTCGTCTAGGAGAGCTGGCCGCAGTCAGC
AACCACCACTGGCCTGGAGGTCCGGTGTGCTTCTTGATGAAGTTCTCGTCGGCGAACTTGGCGCCGTAGATCGACTCGCCTCCGGTGCCGTTTCCGGCGG
TGAAGTCCCCTCCCTGGCACATGAACCCTGGGATCACTCGGTGGAAGGAGGAGCCCTTGTAGTGCAGGGGCTTGCCGCTGCGGCCAACGCCCTTCTCTCC
GGTGCAGAGAGCCCTGAAGTTCTCGGCGGTGCGGGGGGTGGTGTCGGCGAAGAGCTCCATGACGATGCGGCCGGCAGGCTGGCCTCCGATCGTCATGTCG
AAGAAGACCTTAGGGTTTGAAGCCATTGATGAGAATTTCGAGGGTTTGTTTGGATCGTTCACGAAGAGATTTGAGGAAAACGAGAGTAATGATGCTTAGG
GTTTGCGATGCGT