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Detailed information on CNT30128639


BLAST search results

BLAST vs Swiss-Prot:
sp|P86548|SBTXB_SOYBN, E-value = 1e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691021Corymbia citriodoraOryza sativa18.0526.2586.5289forward
CNT3043301Corymbia citriodoraPrunus dulcis25.5617.6783.33126forward
CNT30167183Corymbia citriodoraPistacia vera28.622.5281.56141forward
CNT30568322Corymbia citriodoraActinidia chinensis25.5633.684.13126forward
CNT30441614Corymbia citriodoraAegilops tauschii27.3816.3686.67135forward
CNT30240409Corymbia citriodoraAvena sativa25.7617.5786.61127forward
CNT30667711Corymbia citriodoraTriticum dicoccoides27.3819.9188.15135forward
CNT30140197Corymbia citriodoraLolium perenne28.617.6585.82141forward
CNT3010238Corymbia citriodoraZea mays27.7913.8783.21137forward
CNT30653963Corymbia citriodoraRosa chinensis28.817.0788.03142forward
CNT30686175Corymbia citriodoraTriticum urartu27.3817.6588.15135forward
CNT30722480Corymbia citriodoraTriticum spelta27.3823.8188.15135forward
CNT30155236Corymbia citriodoraPrunus persica23.9413.2983.05118forward
CNT3035490Corymbia citriodoraCucumis melo24.952582.93123forward
CNT30100563Corymbia citriodoraOryza rufipogon25.3513.3887.2125forward
CNT30575409Corymbia citriodoraOryza barthii25.3520.1387.2125forward

Expression of CNT30128639

Peptides detected in this lncRNA

>peptide 1 (34 aa)
DTTDTQQTPLIAHKPTIRLAEQLHTLKGEKQGHP*

>peptide 2 (48 aa)
MATGFEVLPELDPTFSIAFTMGFPERPTPFSPVQRARKFSAVRGTTSA*

Sequence

>CNT30128639
CGACACGACAGACACCCAACAGACACCACTGATCGCCCATAAGCCCACGATCAGATTGGCCGAACAACTCCACACACTAAAAGGCGAAAAACAAGGACAC
CCATAAGACAAGACCCACGCTCGAAAACGGACAAGAGATCAGATCAAGATTCCGTTGGGAGACGGGGCTGGGATCCGGCGACCGACGGGGGCCGCCCGAT
CTAGGAGAGCTGGCCGCAGTCGGCGATGGCGACGGGCTTCGAGGTCCTGCCGGAGCTGGACCCCACCTTCTCGATCGCCTTCACGATGGGCTTCCCGGAG
CGGCCGACGCCCTTCTCCCCGGTGCAGAGAGCACGGAAGTTCTCCGCCGTGCGCGGCACCACGTCCGCGTAGAGCTCCATCACGATCCGGCCTGCCGGCT
GGCCGCCGACCGTCATGTCGAAGAACACCCTGGGGTTCCCCATGGATCTTTCTCAGAGATTCGCTTGGTTCCTGATTTTCTCGGGAAAATTCG