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Detailed information on CNT30597524


BLAST search results

BLAST vs Swiss-Prot:
sp|P82536|TLP20_SPIOL, E-value = 3e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518775Fraxinus excelsiorJuglans regia34.434.7190.4173forward
CNT30702610Fraxinus excelsiorQuercus lobata30.6612.4586.1565forward
CNT30618033Fraxinus excelsiorSesamum indicum36.799.6587.1878forward
CNT3071229Fraxinus excelsiorQuercus suber39.1511.2587.9583forward
CNT30632225Fraxinus excelsiorVigna unguiculata36.7916.0885.978forward
CNT30507180Fraxinus excelsiorNicotiana attenuata44.8114.0183.1695forward
CNT3043301Fraxinus excelsiorPrunus dulcis40.0911.9285.8885forward
CNT30167183Fraxinus excelsiorPistacia vera30.6610.3886.1565forward
CNT30638631Fraxinus excelsiorCapsicum annuum47.6413.485.15101forward
CNT3090187Fraxinus excelsiorSolanum tuberosum47.6420.2485.15101forward
CNT30303130Fraxinus excelsiorTriticum aestivum22.6414.9189.5848forward
CNT3084160Fraxinus excelsiorVigna radiata36.799.0884.6278forward
CNT30145071Fraxinus excelsiorMedicago truncatula44.8120.4386.3295forward
CNT30442485Fraxinus excelsiorAegilops tauschii23.585.779050forward
CNT30240409Fraxinus excelsiorAvena sativa33.029.6885.7170forward
CNT30667711Fraxinus excelsiorTriticum dicoccoides22.647.0889.5848forward
CNT3075586Fraxinus excelsiorBrassica juncea36.3214.5684.4277forward
CNT30140197Fraxinus excelsiorLolium perenne32.088.5186.7668forward
CNT30653963Fraxinus excelsiorRosa chinensis39.159.9887.9583forward
CNT30624974Fraxinus excelsiorDaucus carota43.412.6486.9692forward
CNT30686005Fraxinus excelsiorTriticum urartu23.5814.29050forward
CNT30155236Fraxinus excelsiorPrunus persica40.099.5785.8885forward
CNT30706413Fraxinus excelsiorPrunus avium45.7529.3984.5497forward
CNT3022997Fraxinus excelsiorPopulus trichocarpa43.417.4285.8792forward
CNT3035654Fraxinus excelsiorCucumis melo30.6623.6490.7765forward
CNT30175854Fraxinus excelsiorVigna angularis36.7923.3584.6278forward
CNT30724737Fraxinus excelsiorLupinus angustifolius41.9813.1788.7689forward

Expression of CNT30597524

Peptides detected in this lncRNA

>peptide 1 (30 aa)
IDSPPVPFPAVKSPPWHMKSGITRWKDDPL*

>peptide 2 (43 aa)
MILCSAKGTEILGGLGYDIGEELHDNPTGRLAADRHVEVNLWIC

Sequence

>CNT30597524
ATCGATTCTCCGCCGGTACCGTTCCCTGCGGTGAAGTCTCCACCCTGGCACATGAAATCAGGGATCACACGGTGGAAGGATGATCCTTTGTAGTGCAAAG
GGCACGGAAATTCTCGGCGGTCTTGGGTACGACATCGGCGAAGAGCTCCATGACAATCCTACCGGCCGGTTGGCCGCCGATCGTCATGTCGAAGTAAACC
TTTGGATTTGCC