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Detailed information on CNT30145071


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W171|CYP1_SOYBN, E-value = 5e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517653Medicago truncatulaJuglans regia28.82782.84134forward
CNT30376622Medicago truncatulaArabidopsis thaliana28.8216.7983.58134forward
CNT3071229Medicago truncatulaQuercus suber37.4223.5883.91174forward
CNT30632225Medicago truncatulaVigna unguiculata38.0636.4981.92177forward
CNT30201798Medicago truncatulaPisum sativum33.7667.3886.62157forward
CNT30506710Medicago truncatulaNicotiana attenuata18.0630.3290.4884forward
CNT30710775Medicago truncatulaGlycine max25.8121.3585120forward
CNT3043301Medicago truncatulaPrunus dulcis54.6235.6281.89254forward
CNT30167183Medicago truncatulaPistacia vera61.2945.5384.21285forward
CNT30569495Medicago truncatulaActinidia chinensis55.2745.4181.71257forward
CNT3084160Medicago truncatulaVigna radiata32.917.8183.01153forward
CNT30312502Medicago truncatulaCamelina sativa19.1425.1484.2789forward
CNT3075586Medicago truncatulaBrassica juncea59.7852.5583.45278forward
CNT30613544Medicago truncatulaArabis alpina26.8821.7880.8125forward
CNT30597524Medicago truncatulaFraxinus excelsior20.4344.8186.3295forward
CNT30653963Medicago truncatulaRosa chinensis54.6230.5382.68254forward
CNT30624974Medicago truncatulaDaucus carota38.0624.3182.49177forward
CNT30155236Medicago truncatulaPrunus persica54.6228.681.89254forward
CNT30430128Medicago truncatulaPapaver somniferum27.5315.6980.47128forward
CNT30706413Medicago truncatulaPrunus avium18.4926.0687.2186forward
CNT3023247Medicago truncatulaPopulus trichocarpa25.8118.5886.67120forward
CNT3035490Medicago truncatulaCucumis melo39.3537.284.7183forward
CNT30175854Medicago truncatulaVigna angularis29.4641.0281.02137forward
CNT30724737Medicago truncatulaLupinus angustifolius21.9415.0990.2102forward

Expression of CNT30145071

Peptides detected in this lncRNA

>peptide 1 (41 aa)
RSQLALRSFQIQIQLSRSPSRCPDLQQPDRTRRVSRQATRS*

>peptide 2 (33 aa)
MMRPAGLPPTLMSKKTLGLTMVAGRVNQLKTLE*

Sequence

>CNT30145071
GGCGATCACAACTGGCTTTGAGGTCTTTCCAGATCCAGATCCAACTTTCTCGATCTCCTTCACGATGTCCAGACCTTCAACAACCTGACCGAACACGACG
TGTTTCCCGTCAAGCCACTCGGTCTTAGCGGTGCAGATGAAGAACTGAGATCCGTTGATCGATTCACCTCCGGTACCGTTTCCGTTGGTGAAATCACCTC
CCTGGCACATGAATTGAGGGATCACACGGTGGAAGGAAGATCCTTTGAAGTGGAGTGGTTTGCCGCTGCGGCCAACTCCTTTTTCGCCGGTGCAGAGAGC
ACGGAAATTCTCAGCGGTGCGGGGAGTGACATCAGCGAAAAGCTCGAAGATGATGCGTCCAGCAGGGTTGCCACCGACGCTCATGTCGAAGAAAACCTTA
GGGTTAACCATGGTTGCGGGGAGAGTGAATCAATTGAAAACTCTAGAGTGAAGAATAAGAATAGG