Detailed information on CNT30100456


BLAST search results

BLAST vs Swiss-Prot:
sp|P86548|SBTXB_SOYBN, E-value = 5e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702610Oryza rufipogonQuercus lobata23.114.5689.4776forward
CNT3071229Oryza rufipogonQuercus suber23.110.389.4776forward
CNT30632225Oryza rufipogonVigna unguiculata23.115.6788.1676forward
CNT30710754Oryza rufipogonGlycine max23.129.2390.7976forward
CNT3043301Oryza rufipogonPrunus dulcis23.110.6688.1676forward
CNT30167177Oryza rufipogonPistacia vera23.110.6485.5376forward
CNT3084160Oryza rufipogonVigna radiata23.18.8586.8476forward
CNT30364404Oryza rufipogonSorghum bicolor23.110.8990.7976forward
CNT30155236Oryza rufipogonPrunus persica21.888.1187.572forward
CNT30706413Oryza rufipogonPrunus avium21.8821.8284.7272forward

Expression of CNT30100456

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSKNTLVFDIAAALGFCEFHRWGIFFLFV*

>peptide 2 (82 aa)
LGPVSVGPGVRHGQDAGAVVLELEHLVGELLAVDRLPSRAVAAGEVAALARPSRTAPSRSAPPELRRRSCRRTPSCSTSPPR*

>peptide 3 (32 aa)
WDPLVLGPAFAMDRMPGLSCLNLNTSSANFSP*

Sequence

>CNT30100456
CTGGGACCCGTTAGTGTTGGGCCCGGCGTTCGCCATGGACAGGATGCCGGGGCTGTCGTGCTTGAACTTGAACACCTCGTCGGCGAACTTCTCGCCGTAG
ATCGACTCCCCTCCCGTGCCGTTGCCGCGGGTGAAGTCGCCGCCCTGGCACGTCCTTCGCGTACAGCTCCATCACGATCCGCCCCGCCGGAGCTCCGCCG
ACGGTCATGTCGAAGAACACCCTCGTGTTCGACATCGCCGCCGCGCTAGGGTTTTGCGAATTTCACAGATGGGGAATATTTTTTCTTTTTGTTTGATTTT
TTTTGCTGTTTCACTTCAGATCGCTGCGT