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Detailed information on CNT30624974


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W171|CYP1_SOYBN, E-value = 3e-90

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517653Daucus carotaJuglans regia33.5212.7581.97244forward
CNT3019668Daucus carotaCitrullus lanatus11.8120.2883.7286forward
CNT3071229Daucus carotaQuercus suber30.7730.3585.27224forward
CNT30632225Daucus carotaVigna unguiculata42.7264.1283.28311forward
CNT30198931Daucus carotaPisum sativum17.5837.7685.94128forward
CNT30507180Daucus carotaNicotiana attenuata41.0744.181.27299forward
CNT30710754Daucus carotaGlycine max15.1142.3189.09110forward
CNT3043301Daucus carotaPrunus dulcis40.5241.3784.75295forward
CNT30167187Daucus carotaPistacia vera53.4357.2184.32389forward
CNT30638631Daucus carotaCapsicum annuum41.6240.1980.2303forward
CNT3090362Daucus carotaSolanum tuberosum32.8350.181.17239forward
CNT30303130Daucus carotaTriticum aestivum23.954.0487.93174forward
CNT30569495Daucus carotaActinidia chinensis33.5243.1186.89244forward
CNT3084160Daucus carotaVigna radiata41.4835.1685.43302forward
CNT30145071Daucus carotaMedicago truncatula24.3138.0682.49177forward
CNT30442485Daucus carotaAegilops tauschii22.819.1587.35166forward
CNT30240409Daucus carotaAvena sativa40.2540.5385.67293forward
CNT30667711Daucus carotaTriticum dicoccoides37.6440.4185.04274forward
CNT30597524Daucus carotaFraxinus excelsior12.6443.486.9692forward
CNT30140197Daucus carotaLolium perenne41.4837.882.12302forward
CNT3010238Daucus carotaZea mays36.9527.2383.64269forward
CNT30653963Daucus carotaRosa chinensis41.6236.4286.14303forward
CNT30686175Daucus carotaTriticum urartu37.6435.8284.67274forward
CNT30722480Daucus carotaTriticum spelta21.0226.9883.01153forward
CNT30364404Daucus carotaSorghum bicolor26.2427.3684.29191forward
CNT30155236Daucus carotaPrunus persica51.244282.31373forward
CNT30430128Daucus carotaPapaver somniferum32.1428.6880.77234forward
CNT30706413Daucus carotaPrunus avium19.2342.4286.43140forward
CNT3022997Daucus carotaPopulus trichocarpa27.8838.4580.79203forward
CNT3035490Daucus carotaCucumis melo55.9182.7283.05407forward
CNT30100563Daucus carotaOryza rufipogon21.0216.3882.35153forward
CNT30575409Daucus carotaOryza barthii20.624.1582150forward
CNT30175854Daucus carotaVigna angularis28.0261.0885.78204forward
CNT30724737Daucus carotaLupinus angustifolius29.9532.2584.86218forward

Expression of CNT30624974

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDSPPVPFPAVKSPPWHMNLGMTRWKEEPL*

Sequence

>CNT30624974
AAATAGTTAGATTAACGCCACAGATTTTATAATCGATCAATAACGATAATTCAGCAAATCGATAAACATTCTTCCAGAGATACAACAATAAACTGAAAAC
ATCCAAATGTAATCATACAAATCGCCGATACTCCCCTCAGATTTTATTTAAAATAAAACATAGCAGCAGTAATTTTAGTTGCGAGATTTAAGAGAGCTGC
CCACAATCAGCAATCACAACAGGCTTAGAGCACCTCCCTCCCGAAGATCCAACCTTCTCAATAGCCCTAACCACATCCATTCCCTCAACAACCTGTCCAA
ACACTACGTGCTTTCCATCGAGCCACTCGGTCTTCTCGGTGCAAATAAAAAACTGCGATCCGTTGGTTCCGGGCCCTGTGTGCTTCCTGACGAAGTTCTC
GTCGGCGAATTTCTCGCCGTAGATGGATTCGCCGCCGGTGCCGTTCCCGGCGGTGAAGTCGCCTCCCTGGCACATGAATTTGGGGATGACGCGGTGGAAG
GAGGAGCCTTTGTAGTGGAGAGGCTTGCGGCTTTTTCCGACGCCTTTCTCGCCGGTGCAGAGTGCTCGGAAGTTCTCGGCGGTGCGGGGAGTGGTGTCGG
CGTAGAGCTCCATCACAATTCTCCCGGCCGGCGCTCCGCCGACGGTCATGTCGAAGAACACCTTAGGGTTTGGCATAGTGCTTAAGAGAGTGTTGAATTG
ATGATAGATGAATAGATACAGATGAATT