Detailed information on CNT30710754


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W171|CYP1_SOYBN, E-value = 5e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640933Glycine maxNymphaea colorata78.8526.8785.85205forward
CNT30517653Glycine maxJuglans regia81.5411.0887.26212forward
CNT30618033Glycine maxSesamum indicum90.7729.2182.2236forward
CNT3019668Glycine maxCitrullus lanatus43.4626.6585.84113forward
CNT3071229Glycine maxQuercus suber91.9232.3893.72239forward
CNT30632225Glycine maxVigna unguiculata48.8526.1994.49127forward
CNT30506710Glycine maxNicotiana attenuata28.4626.7189.1974forward
CNT3043301Glycine maxPrunus dulcis38.8514.1796.04101forward
CNT30167177Glycine maxPistacia vera94.2334.3188.16245forward
CNT3090362Glycine maxSolanum tuberosum77.3142.1485.57201forward
CNT30303130Glycine maxTriticum aestivum66.1553.4285.47172forward
CNT30568322Glycine maxActinidia chinensis48.0833.3388.8125forward
CNT3084160Glycine maxVigna radiata43.0813.0495.54112forward
CNT30552830Glycine maxOryza glaberrima2517.0287.6965forward
CNT30442485Glycine maxAegilops tauschii9528.4983.4247forward
CNT30240409Glycine maxAvena sativa74.2326.6990.67193forward
CNT30667711Glycine maxTriticum dicoccoides65.3825.0785.29170forward
CNT30312502Glycine maxCamelina sativa64.2347.1879.64167forward
CNT30140197Glycine maxLolium perenne92.6930.1688.38241forward
CNT3010238Glycine maxZea mays94.2324.884.9245forward
CNT30624974Glycine maxDaucus carota42.3115.1189.09110forward
CNT30686383Glycine maxTriticum urartu9532.883.81247forward
CNT30364404Glycine maxSorghum bicolor64.6224.0784.52168forward
CNT30155236Glycine maxPrunus persica38.8511.3795.05101forward
CNT30429993Glycine maxPapaver somniferum63.0816.2781.71164forward
CNT30706413Glycine maxPrunus avium38.8530.6193.07101forward
CNT3022997Glycine maxPopulus trichocarpa66.5432.7784.97173forward
CNT3035654Glycine maxCucumis melo38.8536.7389.11101forward
CNT30100456Glycine maxOryza rufipogon29.2323.190.7976forward
CNT30175854Glycine maxVigna angularis41.1532.0494.39107forward
CNT30724737Glycine maxLupinus angustifolius42.3116.2787.27110forward

Expression of CNT30710754

Peptides detected in this lncRNA

>peptide 1 (33 aa)
FSISLTTSIPSTTCPNTTCFPSSHSVFVVQMKN*

>peptide 2 (85 aa)
LYLLDDVHPLDDLSEHDVLSVEPLRLRRADEELRSVGSGTGVRHGEDAGTSVLLHEVLVGELGAVDRLASGAVSGGEVAALAHEVR

Sequence

>CNT30710754
TTCTCTATCTCCTTGACGACGTCCATCCCCTCGACGACCTGTCCGAACACGACGTGCTTTCCGTCGAGCCACTCCGTCTTCGTCGTGCAGATGAAGAACT
GAGATCCGTTGGTTCCGGGACCGGCGTTCGCCATGGAGAGGATGCCGGGACCAGTGTGCTTCTTCACGAAGTTCTCGTCGGCGAACTTGGCGCCGTAGAT
CGACTCGCCTCCGGTGCCGTTTCCGGCGGTGAAGTCGCCGCCCTGGCACATGAAGTTCGG