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Detailed information on CNT30618114


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SBQ7|METK3_PETHY, E-value = 3e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674516Sesamum indicumSetaria viridis30.3122.286.13137forward
CNT30520816Sesamum indicumSetaria italica40.9321.4182.7185forward
CNT30641080Sesamum indicumNymphaea colorata34.2917.3283.87155forward
CNT30549537Sesamum indicumIpomoea triloba48.2332.7384.86218forward
CNT30515028Sesamum indicumJuglans regia48.8926.0382.35221forward
CNT30698521Sesamum indicumQuercus lobata39.631.9185.47179forward
CNT30373104Sesamum indicumArabidopsis thaliana41.1522.1783.87186forward
CNT30266729Sesamum indicumChenopodium quinoa50.2217.6182.82227forward
CNT3021108Sesamum indicumCitrullus lanatus48.8913.4384.62221forward
CNT30729630Sesamum indicumCorchorus capsularis49.5627.3585.27224forward
CNT30381460Sesamum indicumManihot esculenta5024.5982.74226forward
CNT30402638Sesamum indicumBeta vulgaris48.8917.2582.35221forward
CNT30524850Sesamum indicumPhaseolus vulgaris47.5729.7881.86215forward
CNT30628391Sesamum indicumVigna unguiculata48.2319.0181.19218forward
CNT30712018Sesamum indicumGlycine max42.4836.1684.38192forward
CNT3047442Sesamum indicumPrunus dulcis48.8936.4786.88221forward
CNT30158121Sesamum indicumPistacia vera22.121684100forward
CNT30638840Sesamum indicumCapsicum annuum40.9321.6683.78185forward
CNT3090332Sesamum indicumSolanum tuberosum47.5733.0884.19215forward
CNT30190465Sesamum indicumSecale cereale36.2856.9482.93164forward
CNT30294498Sesamum indicumTriticum aestivum47.5726.9181.86215forward
CNT30225566Sesamum indicumHordeum vulgare47.5762.8781.4215forward
CNT30389985Sesamum indicumTriticum turgidum47.5721.1482.33215forward
CNT30561874Sesamum indicumActinidia chinensis46.2423.782.3209forward
CNT30508429Sesamum indicumSolanum lycopersicum25.8847.3784.62117forward
CNT30172560Sesamum indicumTrifolium pratense48.8932.4583.71221forward
CNT30146819Sesamum indicumMedicago truncatula48.8929.4382.81221forward
CNT30437887Sesamum indicumAegilops tauschii47.5730.7181.86215forward
CNT30667060Sesamum indicumTriticum dicoccoides46.933.3981.13212forward
CNT30471290Sesamum indicumSaccharum spontaneum50.2225.2882.82227forward
CNT3013982Sesamum indicumZea mays40.9363.7981.62185forward
CNT30608385Sesamum indicumGossypium raimondii50.2241.2786.34227forward
CNT30218287Sesamum indicumKalanchoe fedtschenkoi31.6427.5587.41143forward
CNT3066706Sesamum indicumLeersia perrieri28.7638.2484.62130forward
CNT30650282Sesamum indicumRosa chinensis50.2219.2783.7227forward
CNT30624603Sesamum indicumDaucus carota29.6520.384.33134forward
CNT30686785Sesamum indicumTriticum urartu34.2915.3585.16155forward
CNT30349162Sesamum indicumEragrostis tef40.9320.3180.54185forward
CNT30368062Sesamum indicumSorghum bicolor50.2220.6681.94227forward
CNT30620812Sesamum indicumCajanus cajan38.7214.0980.57175forward
CNT30597062Sesamum indicumOryza meridionalis48.8920.0982.81221forward
CNT30432398Sesamum indicumPapaver somniferum47.5717.7182.33215forward
CNT30570674Sesamum indicumVitis vinifera46.922.4681.6212forward
CNT3055164Sesamum indicumAmborella trichopoda46.918.4380.66212forward
CNT3025891Sesamum indicumPopulus trichocarpa50.2229.1484.14227forward
CNT3035650Sesamum indicumCucumis melo48.8916.3982.35221forward
CNT30331991Sesamum indicumDioscorea rotundata32.9631.581.88149forward
CNT30101941Sesamum indicumOryza rufipogon48.8926.4781.9221forward
CNT30496713Sesamum indicumDigitaria exilis50.2215.0781.5227forward
CNT30116702Sesamum indicumOryza nivara44.4719.5780.6201forward
CNT30174546Sesamum indicumVigna angularis44.9126.5481.77203forward
CNT30113329Sesamum indicumFicus carica40.2716.982.42182forward
CNT30725315Sesamum indicumLupinus angustifolius49.5622.2783.48224forward

Expression of CNT30618114

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MGPPMTNRPEGLRWKIVFSSRYLAGMTGLITCSLRSLAISSLVTVSSCWVEISTVWTRIGTMAPFSL*

>peptide 2 (45 aa)
MLFEIPGDLVVSDRLIVLGGDKHSVDPNWNHGTVFIVVLNGNLGLP

Sequence

>CNT30618114
TCCTTCACAATCTTGAGGATTTCCTTGTCTGGGATCTTCCCCGTGCCGTAAGTGTCGACGAAAACAGATAACGGCTCAGGCACACCAATTGCGTATGAGA
CTTGTACTATGCACCTGCGAGCAAGGCCGTTGGCCACAATGCTCTTGGCTGCCTGCCTAACGATATAGGCACCACTTCTGTCCACCTTAGTCGGGTCCTT
CCCGGAGAAGGCACCTCCACCATGGGCCCACCAATGACAAACCGACCAGAGGGATTGAGGTGGAAGATTGTCTTCTCATCGAGGTACTTGGCTGGGATGA
CGGGCTTGATAACATGCTCTTTGAGATCCCTGGCGATCTCGTCGTTAGTGACCGTCTCATCGTGCTGGGTGGAGATAAGCACAGTGTGGACCCGAATTGG
AACCATGGCACCGTTTTCATTGTAGTACTCAACGGTAACTTGGGTCTTCCCG