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Detailed information on CNT30515361


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40459|PSBO_TOBAC, E-value = 5e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675230Juglans regiaSetaria viridis30.0948.5481.2133forward
CNT30535986Juglans regiaEucalyptus grandis90.9554.9281.84402forward
CNT30378380Juglans regiaArabidopsis thaliana44.840.1683.33198forward
CNT30277684Juglans regiaChenopodium quinoa82.5840.7480.82365forward
CNT30727932Juglans regiaCorchorus capsularis67.6522.9382.94299forward
CNT30379731Juglans regiaManihot esculenta81.932.6184.81362forward
CNT30525147Juglans regiaPhaseolus vulgaris80.0957.8482.77354forward
CNT30708164Juglans regiaGlycine max83.9429.1284.91371forward
CNT3042430Juglans regiaPrunus dulcis63.825.983.69282forward
CNT3091254Juglans regiaSolanum tuberosum75.3422.0482.28333forward
CNT30181115Juglans regiaSecale cereale56.1118.778.63248forward
CNT30290508Juglans regiaTriticum aestivum56.1132.3879.03248forward
CNT30386646Juglans regiaTriticum turgidum56.1118.8279.03248forward
CNT30567883Juglans regiaActinidia chinensis86.4317.7384.55382forward
CNT30592113Juglans regiaMusa acuminata91.455.4979.95404forward
CNT30541282Juglans regiaBrassica napus66.7435.5479.32295forward
CNT30234321Juglans regiaBrassica oleracea67.4222.0978.52298forward
CNT30508746Juglans regiaSolanum lycopersicum31.917.0384.4141forward
CNT30147114Juglans regiaMedicago truncatula83.9420.9282.21371forward
CNT30436551Juglans regiaAegilops tauschii56.1126.2279.03248forward
CNT30244672Juglans regiaAvena sativa59.535.479.09263forward
CNT30658229Juglans regiaTriticum dicoccoides56.1122.579.03248forward
CNT30264716Juglans regiaBrassica rapa66.7416.4178.98295forward
CNT30614251Juglans regiaArabis alpina29.6446.1380.92131forward
CNT3010855Juglans regiaZea mays30.0923.7181.2133forward
CNT30607994Juglans regiaGossypium raimondii67.4234.3383.22298forward
CNT30208990Juglans regiaHelianthus annuus22.8516.4285.15101forward
CNT30626592Juglans regiaDaucus carota45.2522.784.5200forward
CNT30681617Juglans regiaTriticum urartu56.1120.7278.63248forward
CNT30342715Juglans regiaEragrostis tef45.722.4779.7202forward
CNT30368766Juglans regiaSorghum bicolor64.9331.2378.05287forward
CNT30621504Juglans regiaCajanus cajan30.778.6388.97136forward
CNT30408540Juglans regiaPapaver somniferum26.2427.2382.76116forward
CNT30704474Juglans regiaPrunus avium34.3920.4684.21152forward
CNT3023343Juglans regiaPopulus trichocarpa72.443.1385.62320forward
CNT30121175Juglans regiaCitrus clementina76.9274.5683.82340forward
CNT30584070Juglans regiaEchinochloa crusgalli30.0911.2981.2133forward
CNT30497590Juglans regiaDigitaria exilis47.2923.7579.43209forward
CNT30724033Juglans regiaLupinus angustifolius83.9433.0485.44371forward
CNT3051042Juglans regiaCucumis sativus65.1652.8484.38288forward

Expression of CNT30515361

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MQLHCHSQLSHPCPLGPRTRSLGKMAPKTLR*

>peptide 2 (46 aa)
SMINQAEHTRFPGSSHPLESLLPNQCLKAGRSRTLQSPPQSQACSW*

Sequence

>CNT30515361
GGTCTATGATCAATCAAGCTGAGCATACCAGATTCCCTGGATCTTCACATCCTTTGGAGTCTTTGCTCCCAAATCAGTGTCTGAAGGCTGGACGCTCTCG
AACACTCCAATCACCTCCCCAGTCTCAGGCTTGCTCTTGGTGACACTCAGGGTGATTTTCCCTTTTGATGAAGATGTATTCTTGATGTTCTCCTTCACAA
GTTCTTCCTCGTCTCCTCTACCTCCAGCAGGCAATGCAACTGCATTGTCATAGCCAGTTGAGCCACCCCTGCCCTTTGGGTCCAAGAACGAGGAGCCTCG
GTAAGATGGCACCAAAAACTCTCCGCTAAAGCTATCTGGTTTCCCTGATGCCACCAACTGTTTGATGGTGAAAAGGAATGGCACTCTCTCGCCTCCAGGC
AGCTGAACAGTCACGGCTGCCATTGTTGTGTTCAAAGCTGAT