Detailed information on CNT30708164


BLAST search results

BLAST vs Swiss-Prot:
sp|P14226|PSBO_PEA, E-value = 4e-117

BLAST vs NONCODE:
NONGMAT000837, E-value = 3e-90

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535986Glycine maxEucalyptus grandis38.767.3580.53493forward
CNT30515361Glycine maxJuglans regia29.1283.9484.91371forward
CNT30378380Glycine maxArabidopsis thaliana19.750.9178.09251forward
CNT30196966Glycine maxPisum sativum5.5729.5888.7371forward
CNT30567886Glycine maxActinidia chinensis43.4938.0280.69554forward
CNT30592113Glycine maxMusa acuminata1933.2481.4242forward
CNT30237633Glycine maxBrassica oleracea13.4237.2585.38171forward
CNT30244319Glycine maxAvena sativa13.8920.2381.36177forward
CNT30607994Glycine maxGossypium raimondii23.2334.183.45296forward
CNT30207216Glycine maxHelianthus annuus26.7762.5778.01341forward
CNT30356664Glycine maxLactuca sativa17.945.1584.21228forward
CNT30408540Glycine maxPapaver somniferum25.3575.8279.88323forward
CNT30121175Glycine maxCitrus clementina25.3570.8382.66323forward
CNT30725886Glycine maxLupinus angustifolius44.5824.8184.68568forward
CNT3051042Glycine maxCucumis sativus32.7376.5182.97417forward

Expression of CNT30708164

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MISYIMIAKSDVGFICIRTIQHIKGERESK

>peptide 2 (62 aa)
MSCSGFRRRLASLEHLLHSLPECIQSPLLFIQLFLFLFPCHLLLHLLLLSLILLHILLCKFK*

>peptide 3 (37 aa)
MYTITLVIHTTIFVSISLPSFVTSLTSFSYFVAYSIV*

>peptide 4 (52 aa)
MKHFYCSPWQVPLHLLFHQQAKQQHCHNQLRHPFPWGPRKRNHGKTALGTPH*

Sequence

>CNT30708164
GGGAGTTACAAAAAAGTAGAGTTACAACATTAAGAAAAGGTCTATGAGTCAAGCTGAGCATACCAGATGCCTTGAATCTTAACATCCTTAGGAGCTTTAG
CCCCCAAATCAGTATCAGAAGGCTGAACACTCTCGAACACCCCAATAACCTCACCAGTCTCAGGCTTGGACTTGGTGACACTCAAGGTGATTTTCCCTTT
GGAAGATGAAGCACTTTTATTGTTCTCCTTGGCAAGTTCCTCTTCATCTCCTCTTCCACCAGCAGGCAAAGCAACAGCATTGTCATAACCAGTTGAGGCA
CCCCTTCCCTTGGGGTCCAAGAAAGAGGAACCACGGTAAGACGGCACTAGGAACTCCCCACTGAAGCTGTCTGGTTTCCCAGATGCCACCAACTGCTTAA
TGGTGAAGAGGAATGGCACACGCTCTCCCCCTGGAAGCTGTACAGTGACAGCAGCATAGTCAATTCCGTCTTTCTCCTCGAATTTCACCGTTCCATCGGA
TGAAACCTCGAAGGGACCCTCGATCTCGTCCAGGGTGTAGGTCAGACGAGTCATGAGCTTGGTGTTCTGAAATTCGAGCGGGGCATTCTTGGCCACACCC
TCTGCCTTCACCGCACAACTTCTGGGCCTTGTATTTCCCTGCCTTGAAGGCAAATGAGTCCACTCCACCTTCAATGGTTGGGCACTGATTAGCAGTTCCA
GTTCCCTTCACTTCCAAGTATGTCTTGCTCTGGATTTCGTCGAAGGTTAGCCTCTTTGGAACACCTTCTGCACTCGCTCCCTGAATGTATACAATCACCC
TTGTTATTCATACAACTATTTTTGTTTCTATTTCCCTGCCATCTTTTGTTACATCTCTTACTTCTTTCTCTTATTTTGTTGCATATTCTATTGTGTAAGT
TCAAATAACATTTCTCATGTACAATATTGCACAACATTCTTTCTTAGTCATGCATGATGCCACTCGGTCACAAAACAAGTAGATGAACTAGTAAATTAAG
ATGCAGTATCAATTTTAATAAATAAATTAACCACTCAACAAGCATCACAAAATTATTAGATGAACTGGTAAGTTAAGACATGTCAATTATAATAAGTAAA
TTAGAGATATTTAAGATCATATGCTACGATTGTGTAGTTTATTGAAGCCGCAGGTTGTTGGGGTTCTGCATGTAGATATATGATATGATTTCATATATTA
TGATTGCAAAATCTGATGTTGGTTTTATTTGTATTAGAACAATTCAACATATTAAGGGAGAAAGGGAAAGTAAG