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Detailed information on CNT30567883


BLAST search results

BLAST vs Swiss-Prot:
sp|P23322|PSBO_SOLLC, E-value = 2e-107

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674637Actinidia chinensisSetaria viridis3.4833.9486.6775forward
CNT30535986Actinidia chinensisEucalyptus grandis23.0267.7680.65496forward
CNT30515361Actinidia chinensisJuglans regia17.7386.4384.55382forward
CNT30374900Actinidia chinensisArabidopsis thaliana6.1322.6481.82132forward
CNT30196966Actinidia chinensisPisum sativum2.6523.7587.7257forward
CNT3091587Actinidia chinensisSolanum tuberosum16.3895.6683.85353forward
CNT30287281Actinidia chinensisTriticum aestivum9.2826.7479200forward
CNT30221070Actinidia chinensisHordeum vulgare4.1338.3683.1589forward
CNT30386162Actinidia chinensisTriticum turgidum9.2820.0879200forward
CNT30592113Actinidia chinensisMusa acuminata22.6567.0378.48488forward
CNT30544024Actinidia chinensisBrassica napus6.0324.7182.31130forward
CNT30244672Actinidia chinensisAvena sativa12.3435.877.82266forward
CNT30658559Actinidia chinensisTriticum dicoccoides9.2824.3679200forward
CNT30259875Actinidia chinensisBrassica rapa4.1832.8585.5690forward
CNT30597992Actinidia chinensisFraxinus excelsior11.3770.286.53245forward
CNT30681552Actinidia chinensisTriticum urartu9.2822.5579200forward
CNT30348024Actinidia chinensisEragrostis tef12.6744.2579.49273forward
CNT30571041Actinidia chinensisVitis vinifera9.6557.387.98208forward
CNT30319324Actinidia chinensisAsparagus officinalis5.839.1881.6125forward
CNT30121175Actinidia chinensisCitrus clementina15.4573.0383.48333forward
CNT30584058Actinidia chinensisEchinochloa crusgalli12.6221.4878.68272forward
CNT30497590Actinidia chinensisDigitaria exilis12.6230.9177.94272forward
CNT30557734Actinidia chinensisPanicum hallii7.0521.5980.92152forward

Expression of CNT30567883

Peptides detected in this lncRNA

>peptide 1 (43 aa)
TRVEHTRFLGSSHPLEPLPPNQCQMAECFQKHRSPPRSQACSW*

>peptide 2 (45 aa)
MKMEVEMEKLYDPIVRDHWIIYIFHFHFRFSHQILDLNTTLVDST*

>peptide 3 (41 aa)
MLYLPGLNANFSTPPSMVGHWLAVLGLPRHLLPRLSKICRC*

>peptide 4 (95 aa)
MQQLEMRRHHTETMRAEVARANPATLVASAHFWAKSLKSACREQVSLALPWSTPNALQTTGLSFTVVRAGMPPPRLAGCLRVATACSEAAISVSLS

>peptide 5 (51 aa)
LELSIPDSLDLHILWNLCPQISVRWLNAFKNTDHLPALRLALGDTEGDFPC*

>peptide 6 (53 aa)
MLSKTPITSPLSGLLLVTLRVIFPVDDAVFFMFSLTSSSSSPLPPAGSATALS*

>peptide 7 (31 aa)
MLQMERIEIPILCMLKARNALFFALMLRKKT*

Sequence

>CNT30567883
ACTCGAGTTGAGCATACCAGATTCCTTGGATCTTCACATCCTTTGGAACCTTTGCCCCCAAATCAGTGTCAGATGGCTGAATGCTTTCAAAAACACCGAT
CACCTCCCCGCTCTCAGGCTTGCTCTTGGTGACACTGAGGGTGATTTTCCCTGTTGATGATGCAGTGTTCTTTATGTTTTCCTTAACGAGCTCCTCTTCA
TCCCCTCTCCCTCCTGCCGGAAGTGCAACTGCATTGTCATAACCGGTAGAGCCACCCCTTCCCTTTGGGTCCAAGAAAGACGAGCCTCTGTATGACGGCA
CAAGAAACTCTCCACCGAAGCTCTCTGGTTTACCGGATGCTACCAACTGTTTGATGGTGAAGAGGAAGGGCACACGCTCACCACCAGGCAATTGAACTGT
GACTGCAGCGTAGTCAATTCCATCTTTCTCCTCGAACTTAACTGCGCCATCAGGAGAGACTTCGAAGGGTCCCTCGATTTCATCGAGGGTGTAGGTTAAA
CGGGTCATAAGCTTGACGAGCCTCTGTATGACGGCACAAGAAACTCTCCACCGAAGCTCTCTGGTTTACCGGATGCTACCAACTGTTTGATGGTGAAGAG
GAAGGGCACACGCTCACCACCGGGCAATTGAACTGTGACTGCAGCGTAGTCAATTCCATCTTTCTCCTCGAACTTAACTGTGCCATCAGGAGAGACATCG
AAGGGTCCCTCGATCTCATCGAGGGTGTAGGTTAAACGGGTCATAAGCTTGGTATTTTGGAACTCAGGAGGGGCATTCTTGTTCACACCCTCAGCCTTGA
CAGTGAATGAGGTGGGTTCCAAGCAAAATTTCTTCATGTTGTATTTGCCTGGCTTGAATGCAAATTTTTCTACACCACCGTCAATGGTTGGGCACTGGTT
AGCCGTTTTGGGACTCCCTCGGCACTTGCTCCCTAGATTGTCCAAGATATGCAGGTGTTAGTATCTTTTCCCACAACGATGGAAATGAAGAGAAAATAAA
CAAGTAAAATATATCACTAATCAAACCAAAACCAGAATAACCAAACCAATTTTAGGATGAAGAACGGGATTTGATAATATGTTGCAATCGCATACATTGA
AATAGAAATCTCCATCTGATGCTACAGATGGAGAGGATTGAAATCCCCATCTTATGCATGTTGAAGGCTCGAAACGCTCTTTTCTTCGCTTTAATGCTTA
GAAAGAAAACATAACACTAAAGGAACCCGGTATATTCTACTTGCAGTAGCAGTAAAGCAGCAAGGTTTGAGTTCCACCAGTACCAGGAATGGCATATGAG
GTTTACTTGGATAAAGCAAACTCATGAACCAGATGATATTAGTTAAGAAATAGAGGTTTGAATGGCATTTCAAACTCTGCTTAGTGCAAGTAGCCAACAG
TCATACTTGGTAACGAAACACCCTTAGGCTGTGTTTGGATCCCAGATTGGTAAGGGAAAAGGAAATGAAAATGGAAGTGGAAATGGAAAAGTTATACGAT
CCAATCGTTCGGGACCATTGGATCATCTACATTTTCCATTTTCATTTCCGTTTTTCTCACCAAATCCTTGATCTAAACACAACCTTAGTGGATTCCACTT
AATGACCAAACAACAATAGCATGAAAAAAGTGCACTACTTATTTTGGCTTTCTGATTACTAAAATTCGTCATTAATAATCAGACTATAGCAGTAAAATAA
GAATTATATGCAACTTTGACTCTTTTTCTGCTATTCTTCTGATTTTTACTTTAATTCTGATAAACCAGCTAGTGTTTACTAGAAATACTGTACTCGATTT
AAGTGCAGCAATCAGCTTTTCAAACACACACAAGAAAGATTCAAGCTAAATTTTCAACAGAACAATATGCAGCAGCTTGAAATGAGAAGGCATCATACCG
AGACGATGAGGGCAGAAGTGGCAAGAGCGAATCCAGCGACCTTGGTAGCATCAGCACACTTCTGGGCCAAGTCCTTGAAATCAGCCTGCAGAGAGCAAGT
CAGCCTGGCACTGCCCTGGTCGACACCGAACGCCTTGCAAACAACCGGCCTCAGCTTCACGGTGGTCCGGGCCGGGATGCCACCGCCGAGGTTGGCAGGT
TGCCTTAGAGTGGCTACTGCTTGCAGTGAGGCTGCCATTTCTGTCTCTCTTTCTG