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Detailed information on CNT30525147


BLAST search results

BLAST vs Swiss-Prot:
sp|P14226|PSBO_PEA, E-value = 5e-94

BLAST vs NONCODE:
NONGMAT000837, E-value = 9e-138

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535986Phaseolus vulgarisEucalyptus grandis72.3960.5281.26443forward
CNT30515361Phaseolus vulgarisJuglans regia57.8480.0982.77354forward
CNT30700663Phaseolus vulgarisQuercus lobata51.859.8183.91317forward
CNT30379569Phaseolus vulgarisManihot esculenta5034.7382.68306forward
CNT30711968Phaseolus vulgarisGlycine max56.2147.6593.02344forward
CNT3091587Phaseolus vulgarisSolanum tuberosum23.8639.5785.62146forward
CNT30181115Phaseolus vulgarisSecale cereale20.429.4382.4125forward
CNT30290560Phaseolus vulgarisTriticum aestivum20.4212.382.4125forward
CNT30565923Phaseolus vulgarisActinidia chinensis69.4420.9281.65425forward
CNT3086112Phaseolus vulgarisVigna radiata39.8739.6195.9244forward
CNT30147114Phaseolus vulgarisMedicago truncatula71.924.8285.91440forward
CNT30659506Phaseolus vulgarisTriticum dicoccoides34.4824.6280.09211forward
CNT30571093Phaseolus vulgarisVitis vinifera23.3734.2186.71143forward
CNT3023343Phaseolus vulgarisPopulus trichocarpa59.4849.0681.32364forward
CNT30121175Phaseolus vulgarisCitrus clementina53.4371.7182.57327forward
CNT30584070Phaseolus vulgarisEchinochloa crusgalli61.9332.1777.84379forward
CNT30724033Phaseolus vulgarisLupinus angustifolius51.9628.3287.74318forward
CNT3051042Phaseolus vulgarisCucumis sativus53.7660.3781.46329forward

Expression of CNT30525147

Peptides detected in this lncRNA

>peptide 1 (34 aa)
SQISVRWLNTLEHTNNLTSLRLGLGDTQGDFPRG*

>peptide 2 (65 aa)
MMRHFCCFPWQVPLHLLFHQQAKQQHCHNLWKHPFPWGPRKSFHGMMAPEMALRSSLASLRPPTA*

Sequence

>CNT30525147
TCCCAAATCAGTGTCAGATGGCTGAACACTCTCGAACACACCAATAACCTCACCAGTCTCAGGCTTGGTCTTGGTGACACTCAAGGTGATTTTCCCCGTG
GATGATGAGGCACTTTTGTTGTTTTCCTTGGCAAGTTCCTCTTCATCTCCTCTTCCACCAGCAGGCAAAGCAACAGCATTGTCATAACCTGTGGAAGCAC
CCCTTCCCTTGGGGTCCAAGAAAGAGCTTCCACGGTATGATGGCACCAGAAATGGCCCTCCGAAGCTCTCTGGCTTCCCTGAGGCCACCAACTGCTTGAT
GGTGAAGAGGAATGGCACACGTTCGCCACCCGGTAGCTGAACCGTCACGGCTGCGTAGTCAATGCCATCTTTCTCCTCAAACTTGACTGTGCCATCAGAA
GACACCTCAAAGGGTCCCTCAATCTCATCAAGAGTGTAGGTCTTGCTCTGGATTTCGTCGAAGGTTCCAAACCAAAAGCCTTTGAAATGGACTGAGGGGA
CTTTAGCTGCAAAGTGTTGGTTCTGCCCAACTTGGTTGGTTGCATGAAAGTAGCTGCTGCTTGTAGTGAGGCTGCCATTGCCACCAATGTAGTGTTCCCT
CCTCACACTTTG