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Detailed information on CNT3051042


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40459|PSBO_TOBAC, E-value = 3e-99

BLAST vs NONCODE:
NONCSAT002192, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535986Cucumis sativusEucalyptus grandis42.231.4279.13230forward
CNT30515361Cucumis sativusJuglans regia52.8465.1684.38288forward
CNT30700663Cucumis sativusQuercus lobata62.5764.3482.7341forward
CNT30378380Cucumis sativusArabidopsis thaliana40.9245.2379.37223forward
CNT30277684Cucumis sativusChenopodium quinoa76.8846.7682.1419forward
CNT30727933Cucumis sativusCorchorus capsularis71.5626.0981.03390forward
CNT30379731Cucumis sativusManihot esculenta79.6339.181.11434forward
CNT30525147Cucumis sativusPhaseolus vulgaris60.3753.7681.46329forward
CNT30708164Cucumis sativusGlycine max76.5132.7382.97417forward
CNT3042430Cucumis sativusPrunus dulcis35.0517.5482.72191forward
CNT3091587Cucumis sativusSolanum tuberosum43.363.9681.36236forward
CNT30567886Cucumis sativusActinidia chinensis84.2231.582.57459forward
CNT30592113Cucumis sativusMusa acuminata22.7517.0380.65124forward
CNT3086112Cucumis sativusVigna radiata57.6150.9779.94314forward
CNT30543700Cucumis sativusBrassica napus20.189.3883.64110forward
CNT30234321Cucumis sativusBrassica oleracea20.188.1583.64110forward
CNT30508746Cucumis sativusSolanum lycopersicum57.838.0479.68315forward
CNT30147114Cucumis sativusMedicago truncatula75.9623.3581.88414forward
CNT30264716Cucumis sativusBrassica rapa20.186.1284.55110forward
CNT30597992Cucumis sativusFraxinus excelsior38.3559.8982.3209forward
CNT30607994Cucumis sativusGossypium raimondii33.3920.9784.62182forward
CNT30207216Cucumis sativusHelianthus annuus29.5429.5479.5161forward
CNT30718209Cucumis sativusMalus domestica golden60.9224.6781.33332forward
CNT30626592Cucumis sativusDaucus carota67.5241.7781.25368forward
CNT30357143Cucumis sativusLactuca sativa59.2744.883.28323forward
CNT30408540Cucumis sativusPapaver somniferum40.5551.8879.64221forward
CNT30571041Cucumis sativusVitis vinifera33.3950.1486.81182forward
CNT30704492Cucumis sativusPrunus avium41.123.8683.48224forward
CNT3023343Cucumis sativusPopulus trichocarpa60.5544.4784.24330forward
CNT30121175Cucumis sativusCitrus clementina50.0959.8782.78273forward
CNT3036059Cucumis sativusCucumis melo43.8539.0598.33239forward
CNT30724288Cucumis sativusLupinus angustifolius84.7740.3180.09462forward

Expression of CNT3051042

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MQQHYHIQLNLLFPLGPRKTSHGKMGLKSLH*

>peptide 2 (59 aa)
SGLLLVTLKVIFPVEDEAFFMFSLASSSSSPLPPAGNATALSYPVEPPLPFGSKKDEPR*

>peptide 3 (41 aa)
MSLVFWNSGGAFLLTPSAFTVKEVVVLEANLEGCIRVAAAA*

Sequence

>CNT3051042
CTCAGGCTTGCTCTTGGTCACACTCAAAGTGATTTTCCCTGTTGAAGATGAAGCATTCTTTATGTTTTCTTTAGCAAGTTCTTCTTCATCACCTCTCCCT
CCAGCAGGCAATGCAACAGCATTATCATATCCAGTTGAACCTCCTCTTCCCTTTGGGTCCAAGAAAGACGAGCCACGGTAAGATGGGACTAAAAAGTCTC
CACTAAAGCTCTCTGGTTTTCCAGAAGCCACCAATTGTTTGATGGTGAAGAGGAACGGGACACGCTCACCTCCCGGCAACTGGACAGTGACAGCAGCATA
GTCAATTCCATCTTTCTCCTCAAACTTGATCGAACCATCAGCACCAACTTCAAAGGGTCCTTCAATCTCGTCTAGTGTGTAAGTTAGACGAGTCATGAGC
TTGGTGTTTTGGAATTCTGGTGGGGCGTTCTTGCTCACTCCTTCAGCCTTCACAGTGAAAGAAGTGGTAGTTCTTGAAGCCAACTTGGAGGGTTGCATAA
GGGTAGCCGCGGCCGCCTGAACTGAAGCCGCCATTGTTGTATCCG