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Detailed information on CNT30658229


BLAST search results

BLAST vs Swiss-Prot:
sp|P27665|PSBO_WHEAT, E-value = 2e-127

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515361Triticum dicoccoidesJuglans regia22.556.1179.03248forward
CNT30378380Triticum dicoccoidesArabidopsis thaliana9.3520.8986.41103forward
CNT3091587Triticum dicoccoidesSolanum tuberosum9.2627.6485.29102forward
CNT30263014Triticum dicoccoidesBrassica rapa23.3228.8879.38257forward
CNT3010265Triticum dicoccoidesZea mays30.0445.9190.63331forward
CNT30607994Triticum dicoccoidesGossypium raimondii15.8820.1680.57175forward
CNT30681086Triticum dicoccoidesTriticum urartu62.6177.1899.86690forward
CNT30583886Triticum dicoccoidesEchinochloa crusgalli55.5468.4685.62612forward

Expression of CNT30658229

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLPVDEDAFFTFSLANSSSSPLPPAGSATALS*

>peptide 2 (62 aa)
MSLVFWKAGGSFFWMPSALTVKEVGSRQNFFISYLPALKGKESTPPSMVGHWFAVPVPFTSM*

>peptide 3 (40 aa)
MSDCREQEARPPILAGISVAAAWRDAAMLVGGLVRGRIDPT

Sequence

>CNT30658229
ATGGGGGATCAATATCATGAGTTGGCGAGGAAGAAACAATAATAACAGAAGCTAAAATATAAACCGACACCCTGGGTTTAGATTACTAGATACACACACA
AACACATTTGTTGCCTCGATTGTTTCCTCTCCACCGATCAACCCACGTACGCATGCACACAAGATGAGTATCTTCACTTCTGCTCTGCTCTAGTTAGACT
CGAGCTGCGCGTACCACACACCCTGGATCTTGACATCCTTGGGCGCCTTGGCGCCGAGGTCGGTGTCTGACGGCTGCACGCTCTCGAAGACACCGATCAC
CTCGCCGGTCTCCGGCTTGCTCTTGGTCACGCTGAGCGTGATGTTGCCCGTGGACGAGGACGCGTTCTTCACGTTCTCCTTAGCCAACTCCTCCTCGTCT
CCTCTGCCTCCGGCAGGTAGCGCCACGGCGTTGTCGTAGCCAGTAGAGCCACCACGGCCCTTTGGGTCGAGGAAAGACGAACCCCTGTAGCTGGGCACGA
GGAAGGGCCCGCTGAAGCTCTCGGGCTTGCCGGTAGCGACGAGCTGCTTGACGGTGAGACGGGTCATGAGCTTGGTTTTCTGGAAGGCCGGCGGCTCGTT
CTTCTGGATGCCCTCGGCCTTGACGGTGAAGGAGGTGGGCTCCAGGCAGAACTTCTTCATCTCGTACTTGCCGGCCTTGAAGGGGAAGGAGTCGACGCCG
CCGTCGATGGTCGGGCACTGGTTCGCGGTGCCGGTACCCTTCACCTCCATGTAGGTCTTGCTCTGGATCTCGTCGAAGGTCAGCCTCTTGGGCGCCCCCT
CCGCGCTCGCGCCCTGCACCCACGCCTGTCACTCTAGCTAGCTGGACTGGAGTGGAGTAAACGGCCATGGACGGCAATAGAATGGATTAGTCAGCTTACG
GAGACGAGGAGGGCAGAGGTGGCGAGGGCGAAGCCGGCCATCTTGGCGGCGTCGGCGCACTTGCTTGCGACCTCCCTGATGTCGGACTGCAGGGAGCAGG
AGGCCCGGCCGCCGATCTTGGCCGGCATCAGCGTGGCCGCGGCTTGGAGAGACGCTGCCATGTTGGTCGGTGGCTTGGTACGCGGGAGGATCGATCCCAC
TC